Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005641503.1 |
| length | 487 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | LOC120572866 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 42838453 ~ 42840995 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005641075.1 | lncRNA | downstream | 5782 | 42821613 ~ 42832671 (-) | True | LOC120570523 |
| XR_005638096.1 | lncRNA | downstream | 106070 | 42731419 ~ 42732383 (-) | True | LOC120553091 |
| TU31686 | lncRNA | downstream | 123307 | 42714932 ~ 42715146 (-) | True | G23416 |
| TU31662 | lncRNA | downstream | 164859 | 42673188 ~ 42673594 (-) | True | G23396 |
| TU31661 | lncRNA | downstream | 195173 | 42643070 ~ 42643280 (-) | True | G23395 |
| TU31746 | lncRNA | upstream | 87726 | 42927152 ~ 42927449 (-) | True | G23470 |
| TU31749 | lncRNA | upstream | 94907 | 42934333 ~ 42934806 (-) | True | G23473 |
| TU31762 | lncRNA | upstream | 140236 | 42979662 ~ 42979887 (-) | True | G23486 |
| TU31766 | lncRNA | upstream | 142429 | 42981855 ~ 42982140 (-) | True | G23490 |
| TU31773 | lncRNA | upstream | 150048 | 42989474 ~ 42989764 (-) | True | G23497 |
| XM_039791142.1 | mRNA | downstream | 69887 | 42739636 ~ 42768566 (-) | True | gal3st2 |
| XM_039791086.1 | mRNA | downstream | 216493 | 42393288 ~ 42621960 (-) | False | fat3a |
| XM_039786068.1 | mRNA | upstream | 65387 | 42904813 ~ 42910737 (-) | True | LOC120549271 |
| XM_039826347.1 | mRNA | upstream | 153365 | 42992791 ~ 43063245 (-) | True | efhd1 |
| XM_039824045.1 | mRNA | upstream | 403128 | 43242554 ~ 43346673 (-) | False | LOC120574039 |
| XM_039792056.1 | mRNA | upstream | 541700 | 43381126 ~ 43383213 (-) | True | LOC120553532 |
| XM_039819073.1 | mRNA | upstream | 727154 | 43566580 ~ 43578411 (-) | True | LOC120570616 |
| unassigned_transcript_105 | other | downstream | 1806575 | 41031806 ~ 41031878 (-) | True | trnak-uuu_7 |
| TU31014 | other | downstream | 2805297 | 40025882 ~ 40033156 (-) | False | LOC120546248 |
| XR_005641089.1 | other | downstream | 4102630 | 38728941 ~ 38735823 (-) | False | LOC120570635 |
| TU30601 | other | downstream | 4474765 | 38353060 ~ 38363688 (-) | False | robo2 |
| XR_005637810.1 | other | downstream | 5092183 | 37734865 ~ 37746270 (-) | False | p4ha3 |
| XR_005641814.1 | other | upstream | 397256 | 43236682 ~ 43346673 (-) | True | LOC120574039 |
| XR_005641815.1 | other | upstream | 397256 | 43236682 ~ 43346664 (-) | False | LOC120574039 |
| unassigned_transcript_106 | other | upstream | 688428 | 43527854 ~ 43527925 (-) | True | trnaa-ugc |
| unassigned_transcript_107 | other | upstream | 688763 | 43528189 ~ 43528260 (-) | True | trnag-ucc_1 |
| unassigned_transcript_108 | other | upstream | 689010 | 43528436 ~ 43528517 (-) | True | trnas-aga_1 |
