RNA id: TU186869



Basic Information


Item Value
RNA id TU186869
length 1012
RNA type TUCP
GC content 0.45
exon number 4
gene id LOC120571613
representative False

Chromosome Information


Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36526529 ~ 36532535 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTTTATAAATATTGTTgtccttttttgtgtttttgtctcttttttgacactttaaaaaaaaatgtagtccttttttaatgtttttgtctttataaGTATAATAACTTTGTCCTGCTACTAGTCACATAGTGTTACTAACACATTCAAAAAGAATACACCAAAACGTGTGCAATGATCATGACTTTTCTAACAGATTCGCCCAGCGGTTTTCACGAAATTCACAAACAAGTATGCTAAATTTCTACACAGACGTTAATGGGAAATTGTCAAGAAATCGACTTAACTCAAATCCCCCCACCCCTCTTTGGGGCCACACCAATCCGCCATACTTTAACAGCCTTCTGATATGAAGCACGTTTTATTAccaaatcacagtttatgtatCGTCCAGTTTTCAGATGGTTTCAGATTTTATGTTAATCAGTCAAAACATCTGTGTCTGTTTCCTCAGCCTCCCCCCTGAGATGTTACGTGTGTATACCGGATGGCTCGGGAACATGCATACAAACAAGCCATGAATGCCGAAAGGGTCTACGGTGTGCTGCAATGAGACTTGTTAGATACCAAGGTGGTTCAAAAGTTCATGAAGAAAACTCAAAAGGATGTGCTGTGGCTGAAGACTGTGGAGAGTACTCGGTCAACTTTGGAATCTCCCAAACCAAAGTTAACATGAAGTGTTGcacctctgacctctgcaaCACCCAGCCGGCCCCAGAACCCAGCAAATCCAAACCAAACGGTAAACAGTGCTACTGGTGCGATAGCCAAAGGTGCAACAACACCCTAAACTGTGAGGGGAACGAAGACAACTGCATCTCAGCAACagAGACCCAAGGGGAACATAGTGTGACCGTGAAGGGCTGTGTGTCCAAGCACCTGTGCACCACGAGGGATAAATCCTGGGCCCGAAAACTCACATATAGCTGTTGTAAGGGGAACCTCTGCAACGGAGCCAGTAACCACGGCGCCGGGCTGGTGCTGCTGGCCGCCCCGCTGCTCTCTTTCCTCGGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186854 lncRNA upstream 5303 36518349 ~ 36523998 (+) True G138665
TU186922 lncRNA upstream 11602 36488301 ~ 36517699 (+) True G138727
TU187149 lncRNA upstream 37981 36489652 ~ 36491320 (+) True G138882
TU186936 lncRNA upstream 41699 36481979 ~ 36487602 (+) True G138741
TU187142 lncRNA upstream 51963 36476598 ~ 36477338 (+) True G138876
TU186917 lncRNA downstream 21124 36553567 ~ 36591216 (+) True G138722
TU187163 lncRNA downstream 64224 36596667 ~ 36597862 (+) True G138894
TU187644 lncRNA downstream 100342 36632785 ~ 36633387 (+) True G139171
TU187639 lncRNA downstream 128964 36661407 ~ 36663921 (+) True G139166
TU187664 lncRNA downstream 142733 36675176 ~ 36812215 (+) True G139187
XM_039820667.1 mRNA upstream 157080 36362325 ~ 36372221 (+) True anp32e
XM_039820671.1 mRNA upstream 175199 36338396 ~ 36354102 (+) True gabpb2a
XM_039819656.1 mRNA upstream 194111 36327686 ~ 36335190 (+) True LOC120570974
XM_039820546.1 mRNA upstream 211948 36307227 ~ 36317353 (+) True LOC120571543
XM_039819658.1 mRNA downstream 26417 36558860 ~ 36605823 (+) True LOC120570975
XM_039819761.1 mRNA downstream 124931 36657374 ~ 36659184 (+) True LOC120571059
XM_039819771.1 mRNA downstream 196950 36729393 ~ 36731238 (+) True LOC120571067
XM_039819767.1 mRNA downstream 215574 36748017 ~ 36761935 (+) True LOC120571063
XM_039819753.1 mRNA downstream 225862 36758305 ~ 36760901 (+) True LOC120571052
TU186859 other upstream 12719 36512606 ~ 36516582 (+) True G138668
TU187150 other upstream 23367 36493103 ~ 36505934 (+) True G138883
TU186858 other upstream 180674 36338410 ~ 36348627 (+) False gabpb2a
TU186888 other upstream 282217 36229330 ~ 36247084 (+) True G138693
TU186931 other upstream 313474 36106717 ~ 36215827 (+) False LOC120571442
TU187744 other downstream 455519 36987962 ~ 36989638 (+) False LOC120571069
TU187538 other downstream 514558 37047001 ~ 37056722 (+) True G139139
TU187611 other downstream 535315 37067758 ~ 37116471 (+) True G139152
TU187560 other downstream 829500 37361943 ~ 37375707 (+) False G139141
XR_005641164.1 other downstream 867849 37400292 ~ 37411180 (+) False LOC120571062

Expression Profile