RNA id: TU186941


Basic Information

Item Value
RNA id TU186941
length 547
lncRNA type inter_gene
GC content 0.42
exon number 3
gene id G138746
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36095674 ~ 36130584 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaacacactctctcacacacacacacacacacacacacacaatgagacacacacacacacacacaaacacacaaacacactctctctcacccacacacagacacacacacatggacacacacacacacacacacacacacacaatgacacacacacacacacaatgacacacacacacaaacactcacacacggacacacatgtacacacacacacacacactgacacacacacaatgacacaaacacactctcacacacacacacactcacaaacacacacacacggacacacatgtacacacacacacacacacacacactgacacacacacaatgacacaaacacactctcacacaaacacacacacaatgacacacacacacaaacactctcacacacacacacacactctgctgagttgtgtaaactgaaatagtcagaagtcatttaaggttaaattctgtgttttaactcttaaataatataataattatttagtCTCCATGTTTGTAGCTGAGAGATGATTGTTGTCTTGTTTCATTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186897 lncRNA upstream 44520 36039527 ~ 36051154 (+) True G138702
TU187080 lncRNA upstream 58855 36036407 ~ 36036819 (+) True G138825
TU187079 lncRNA upstream 92098 36002916 ~ 36003576 (+) True G138824
TU187068 lncRNA upstream 97524 35973681 ~ 35998150 (+) False G138817
TU187087 lncRNA downstream 23879 36154463 ~ 36195924 (+) True G138831
TU186879 lncRNA downstream 53453 36184037 ~ 36193304 (+) True G138684
TU187089 lncRNA downstream 63132 36193716 ~ 36194428 (+) False LOC120571442
TU186926 lncRNA downstream 98534 36229118 ~ 36246720 (+) True G138731
TU186950 lncRNA downstream 105086 36235670 ~ 36249048 (+) True G138755
XM_039820385.1 mRNA upstream 84177 36009987 ~ 36011497 (+) False LOC120571445
XM_039820386.1 mRNA upstream 91440 35979893 ~ 36004234 (+) True riok1
XM_039820380.1 mRNA upstream 137206 35956417 ~ 35958468 (+) True LOC120571435
XM_039819652.1 mRNA upstream 140515 35953855 ~ 35955159 (+) True LOC120570967
XM_039820382.1 mRNA upstream 291791 35803314 ~ 35803883 (+) False LOC120571439
XM_039819654.1 mRNA downstream 17937 36148521 ~ 36153226 (+) True LOC120570972
XM_039820384.1 mRNA downstream 59091 36189675 ~ 36195349 (+) True LOC120571442
XM_039820383.1 mRNA downstream 64766 36195350 ~ 36256121 (+) True LOC120571441
XM_039819655.1 mRNA downstream 144329 36274913 ~ 36277816 (+) True LOC120570973
XM_039820544.1 mRNA downstream 151699 36282283 ~ 36292736 (+) True LOC120571542
TU186903 other upstream 276708 35803304 ~ 35818966 (+) True LOC120571439
TU187041 other upstream 371272 35706900 ~ 35724402 (+) True G138806
TU186887 other upstream 598056 35439291 ~ 35497618 (+) True G138692
TU186837 other upstream 710211 35378839 ~ 35385463 (+) False mindy1
TU186852 other upstream 718636 35372011 ~ 35377038 (+) False LOC120570961
TU186906 other downstream 7563 36138147 ~ 36215671 (+) True G138711
TU186888 other downstream 98746 36229330 ~ 36247084 (+) True G138693
TU186858 other downstream 207826 36338410 ~ 36348627 (+) False gabpb2a
TU187150 other downstream 362519 36493103 ~ 36505934 (+) True G138883
TU186859 other downstream 382022 36512606 ~ 36516582 (+) True G138668

Expression Profile