RNA id: TU187032



Basic Information


Item Value
RNA id TU187032
length 761
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G138801
representative True

Chromosome Information


Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35686719 ~ 35740888 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gagtgtgtttgtgtgtgtgtgtgagagagtgtttgtgtgtgtgtgtgtgtgtgtgagtttgaatgtgtgtgtgtatccatgtgtgtgtgtgtgtcagtgtgtgtccgtgtgtgtgtacacatgtgtgtccacctgtgtgtgtgtgtcattgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtcattgtgtgtgtgtttgtgtgtgtgtgtgtgagtttgtatgtgtgtgtccgtgtgtgtgtgtccacctgtgtgtgtgtttgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagtgtgtttgtgtgtctttgtgtgtgtcagtgtgtgagcgtgtgtgtgtacatgtgtgtccacgtgtgtgtttgtctgggtgtgtgtatgtgcatgtgtgtgtgtgtgtccatgtgagtgtgtccgtgtgtgtgtgagtgtacgtgtgtgtccacgtgtgtgtgtgtgtacgtgtgtgtccgcgtgtgtttgtgtgtgtgtgtgtcattgtgtgtgtatgtgtgtgtgtccatgtgtgtgtgtgtttgtgtgtgtgtgtgtcagtgtgtgtccgtgtttgtgtacgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtacgtgtgtgtgtgtgtgtgtgtgtgagagagtgtgtgtgtgtgtttgtgtgtacgtgtgtgtccatgtgtgtaagtgtgagagagtgtgtgtgtgtttgtgtgtgtgggtccgtctgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187029 lncRNA upstream 21003 35665095 ~ 35665716 (+) True G138799
TU187025 lncRNA upstream 51447 35634437 ~ 35635272 (+) False G138795
TU187024 lncRNA upstream 51447 35634666 ~ 35635272 (+) True G138795
TU186898 lncRNA upstream 72154 35518916 ~ 35614565 (+) True LOC120570963
TU186914 lncRNA upstream 119932 35558713 ~ 35566787 (+) True G138719
TU186907 lncRNA downstream 7623 35748511 ~ 35824187 (+) True G138712
TU186938 lncRNA downstream 12633 35753521 ~ 35782643 (+) True G138743
XR_005641228.1 lncRNA downstream 39923 35780811 ~ 35939350 (+) False LOC120571440
TU186993 lncRNA downstream 56139 35797027 ~ 35816235 (+) True G138775
TU186893 lncRNA downstream 64419 35805307 ~ 35821513 (+) True G138698
XM_039819649.1 mRNA upstream 128167 35518975 ~ 35558552 (+) False LOC120570963
XM_039820368.1 mRNA upstream 170937 35515121 ~ 35515782 (+) True LOC120571424
XM_039819648.1 mRNA upstream 188227 35496877 ~ 35498492 (+) True LOC120570962
XM_039820328.1 mRNA upstream 219551 35447774 ~ 35467168 (+) True LOC120571395
XM_039820382.1 mRNA downstream 62426 35803314 ~ 35803883 (+) False LOC120571439
XM_039819652.1 mRNA downstream 212967 35953855 ~ 35955159 (+) True LOC120570967
XM_039820380.1 mRNA downstream 215529 35956417 ~ 35958468 (+) True LOC120571435
XM_039820386.1 mRNA downstream 239005 35979893 ~ 36004234 (+) True riok1
XM_039820385.1 mRNA downstream 269099 36009987 ~ 36011497 (+) False LOC120571445
TU186887 other upstream 189101 35439291 ~ 35497618 (+) True G138692
TU186837 other upstream 301256 35378839 ~ 35385463 (+) False mindy1
TU186852 other upstream 309681 35372011 ~ 35377038 (+) False LOC120570961
TU186967 other upstream 369855 35303771 ~ 35316864 (+) False mllt11
TU186903 other downstream 62416 35803304 ~ 35818966 (+) True LOC120571439
TU186870 other downstream 324483 36065371 ~ 36257319 (+) True G138676
TU186931 other downstream 365829 36106717 ~ 36215827 (+) False LOC120571442
TU186906 other downstream 397259 36138147 ~ 36215671 (+) True G138711
TU186888 other downstream 488442 36229330 ~ 36247084 (+) True G138693

Expression Profile