RNA id: TU187066


Basic Information

Item Value
RNA id TU187066
length 558
lncRNA type sense_over
GC content 0.50
exon number 3
gene id G138817
representative False

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35971837 ~ 35998150 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtttgtgtgtctctgtgtgtgtgtgtgtctctgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187076 lncRNA upstream 2854 35968594 ~ 35968983 (+) True G138821
XR_005641228.1 lncRNA upstream 32487 35780811 ~ 35939350 (+) False LOC120571440
TU186886 lncRNA upstream 32515 35935624 ~ 35939322 (+) True LOC120571440
TU186875 lncRNA upstream 38001 35837179 ~ 35933836 (+) True G138680
TU187054 lncRNA upstream 129228 35824676 ~ 35842609 (+) True G138813
TU187079 lncRNA downstream 4766 36002916 ~ 36003576 (+) True G138824
TU186911 lncRNA downstream 13314 36011464 ~ 36104537 (+) True LOC120571445
TU187080 lncRNA downstream 38257 36036407 ~ 36036819 (+) True G138825
TU186897 lncRNA downstream 41377 36039527 ~ 36051154 (+) True G138702
TU186941 lncRNA downstream 97524 36095674 ~ 36130584 (+) True G138746
XM_039820380.1 mRNA upstream 13369 35956417 ~ 35958468 (+) True LOC120571435
XM_039819652.1 mRNA upstream 16678 35953855 ~ 35955159 (+) True LOC120570967
XM_039820382.1 mRNA upstream 167954 35803314 ~ 35803883 (+) False LOC120571439
XM_039819649.1 mRNA upstream 413285 35518975 ~ 35558552 (+) False LOC120570963
XM_039820368.1 mRNA upstream 456055 35515121 ~ 35515782 (+) True LOC120571424
XM_039820385.1 mRNA downstream 11837 36009987 ~ 36011497 (+) False LOC120571445
XM_039819654.1 mRNA downstream 150371 36148521 ~ 36153226 (+) True LOC120570972
XM_039820384.1 mRNA downstream 191525 36189675 ~ 36195349 (+) True LOC120571442
XM_039820383.1 mRNA downstream 197200 36195350 ~ 36256121 (+) True LOC120571441
XM_039819655.1 mRNA downstream 276763 36274913 ~ 36277816 (+) True LOC120570973
TU186903 other upstream 152871 35803304 ~ 35818966 (+) True LOC120571439
TU187041 other upstream 247435 35706900 ~ 35724402 (+) True G138806
TU186887 other upstream 474219 35439291 ~ 35497618 (+) True G138692
TU186837 other upstream 586374 35378839 ~ 35385463 (+) False mindy1
TU186852 other upstream 594799 35372011 ~ 35377038 (+) False LOC120570961
TU186870 other downstream 67221 36065371 ~ 36257319 (+) True G138676
TU186931 other downstream 108567 36106717 ~ 36215827 (+) False LOC120571442
TU186906 other downstream 139997 36138147 ~ 36215671 (+) True G138711
TU186888 other downstream 231180 36229330 ~ 36247084 (+) True G138693
TU186858 other downstream 340260 36338410 ~ 36348627 (+) False gabpb2a

Expression Profile