RNA id: TU187666


Basic Information

Item Value
RNA id TU187666
length 247
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G139189
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36679133 ~ 36679802 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gcagacatgttgacatgtcatagtaggaaaagcacaggtgtattcaaaaccattactgatggctgcattccacttaggagaggccctggtattaaaccattactgatggctgcattccacttaggagaggccctggtattaaaccattactgatggctgcattccacttaggagaggtcctggtattaaaccattactgatggctgcattccacttaggagaggtcctggtattgtgcatgctgacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187639 lncRNA upstream 15212 36661407 ~ 36663921 (+) True G139166
TU187644 lncRNA upstream 45746 36632785 ~ 36633387 (+) True G139171
TU187163 lncRNA upstream 81271 36596667 ~ 36597862 (+) True G138894
TU186917 lncRNA upstream 87917 36553567 ~ 36591216 (+) True G138722
TU186854 lncRNA upstream 155135 36518349 ~ 36523998 (+) True G138665
XR_005641182.1 lncRNA downstream 45084 36724886 ~ 36729079 (+) True LOC120571092
TU187690 lncRNA downstream 93382 36773184 ~ 36795537 (+) True G139210
TU187688 lncRNA downstream 113956 36793758 ~ 36850934 (+) False G139210
TU187661 lncRNA downstream 129407 36809209 ~ 36837240 (+) True G139185
TU187662 lncRNA downstream 154877 36834679 ~ 36837240 (+) False G139185
XM_039819761.1 mRNA upstream 19949 36657374 ~ 36659184 (+) True LOC120571059
XM_039819658.1 mRNA upstream 73310 36558860 ~ 36605823 (+) True LOC120570975
XM_039820670.1 mRNA upstream 146598 36526529 ~ 36532535 (+) False LOC120571613
XM_039820669.1 mRNA upstream 146598 36528840 ~ 36532535 (+) True LOC120571613
XM_039820667.1 mRNA upstream 306912 36362325 ~ 36372221 (+) True anp32e
XM_039819771.1 mRNA downstream 49591 36729393 ~ 36731238 (+) True LOC120571067
XM_039819767.1 mRNA downstream 68215 36748017 ~ 36761935 (+) True LOC120571063
XM_039819753.1 mRNA downstream 78503 36758305 ~ 36760901 (+) True LOC120571052
XM_039819759.1 mRNA downstream 282801 36962603 ~ 36984154 (+) True LOC120571057
XM_039819773.1 mRNA downstream 308151 36987953 ~ 36989697 (+) True LOC120571069
TU186869 other upstream 146690 36529301 ~ 36532443 (+) False LOC120571613
TU186859 other upstream 162551 36512606 ~ 36516582 (+) True G138668
TU187150 other upstream 173199 36493103 ~ 36505934 (+) True G138883
TU186858 other upstream 330506 36338410 ~ 36348627 (+) False gabpb2a
TU186888 other upstream 432049 36229330 ~ 36247084 (+) True G138693
TU187744 other downstream 308160 36987962 ~ 36989638 (+) False LOC120571069
TU187538 other downstream 367199 37047001 ~ 37056722 (+) True G139139
TU187611 other downstream 387956 37067758 ~ 37116471 (+) True G139152
TU187560 other downstream 682141 37361943 ~ 37375707 (+) False G139141
XR_005641164.1 other downstream 720490 37400292 ~ 37411180 (+) False LOC120571062

Expression Profile