RNA id: TU187845


Basic Information

Item Value
RNA id TU187845
length 327
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id G139339
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 37608626 ~ 37612267 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gacacacagatacacacatactgacacacagatacacacatactgacacacagatacacacatactgacacacagaaacacacatactgacacacacatacagcacatactgacacacagatacacacatactgacacacagatacacacatactgacacacagatacacacatactgacacacagatacacacatactgacacacacatacacacacagacagacacacacacagacagatacacacacacacacacacacacacacacatacatacagatacacacacacacacacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641186.1 lncRNA upstream 43557 37556812 ~ 37565069 (+) True LOC120571095
TU187831 lncRNA upstream 48772 37559507 ~ 37559854 (+) True G139327
TU187828 lncRNA upstream 52646 37555565 ~ 37555980 (+) False G139326
TU187826 lncRNA upstream 52710 37555036 ~ 37555916 (+) True G139326
TU187827 lncRNA upstream 52710 37555565 ~ 37555916 (+) False G139326
TU188284 lncRNA downstream 50799 37663066 ~ 37737720 (+) True G139590
TU188271 lncRNA downstream 74271 37686538 ~ 37908684 (+) False G139586
TU188264 lncRNA downstream 96351 37708618 ~ 37953101 (+) False G139586
TU188242 lncRNA downstream 169556 37781823 ~ 37908684 (+) False G139586
TU188250 lncRNA downstream 170576 37782843 ~ 37798698 (+) False G139586
XM_039819672.1 mRNA upstream 56728 37527705 ~ 37551898 (+) True LOC120570990
XM_039819671.1 mRNA upstream 85949 37497634 ~ 37522677 (+) True LOC120570989
XM_039819769.1 mRNA upstream 99930 37507022 ~ 37508696 (+) True LOC120571065
XM_039819670.1 mRNA upstream 116083 37478550 ~ 37492543 (+) True LOC120570988
XM_039819669.1 mRNA upstream 132035 37458588 ~ 37476591 (+) True LOC120570987
XM_039819674.1 mRNA downstream 854 37613121 ~ 37616487 (+) True LOC120570991
XM_039819758.1 mRNA downstream 726170 38338437 ~ 38340755 (+) True LOC120571056
XM_039819686.1 mRNA downstream 826405 38438672 ~ 38440490 (+) True LOC120571002
XM_039819754.1 mRNA downstream 850742 38463009 ~ 38465285 (+) True LOC120571053
XM_039819760.1 mRNA downstream 961554 38573821 ~ 38593537 (+) True LOC120571058
TU187628 other upstream 85494 37511709 ~ 37523132 (+) False LOC120570989
TU187637 other upstream 162042 37443392 ~ 37446584 (+) True G139164
XR_005641164.1 other upstream 197446 37400292 ~ 37411180 (+) False LOC120571062
TU187560 other upstream 232919 37361943 ~ 37375707 (+) False G139141
TU187611 other upstream 492155 37067758 ~ 37116471 (+) True G139152
TU188274 other downstream 255642 37867909 ~ 37873124 (+) True G139586
TU188180 other downstream 814483 38426750 ~ 38430454 (+) True G139581
TU188294 other downstream 981308 38593575 ~ 38594662 (+) False G139594
TU188586 other downstream 1325987 38938254 ~ 38942817 (+) False LOC120571012
TU188606 other downstream 1360443 38972710 ~ 38999473 (+) False G139838

Expression Profile