RNA id: TU188294


Basic Information

Item Value
RNA id TU188294
length 461
RNA type TUCP
GC content 0.66
exon number 2
gene id G139594
representative False

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 38593575 ~ 38594662 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGCCTGCACGGAGGACAGGGTCAGAGACGTCTGCACGGAGGACAGGGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGTCTGGATGCAGAGGACAGGGTCAGAGACGCCTGGATGCAGAGGACAGGGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGTCTGCAGCGAGGACAGGGTCAGAGACGCCTGCACGGAGGACAGGGTCAGAGACGCCTGCAGGGAGGACAGGGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGCCTGCACGGAGGACAGGGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGCCTGCACGGAGGACAGGGTCAGAGACGCCTGCAGCGAGGACAGGGTCAGAGACGCGCACGGAGGACAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188522 lncRNA upstream 7966 38584615 ~ 38585609 (+) True G139777
XR_005641180.1 lncRNA upstream 86562 38492940 ~ 38507013 (+) True LOC120571090
XR_005641190.1 lncRNA upstream 175168 38417967 ~ 38418407 (+) True LOC120571099
XR_005641189.1 lncRNA upstream 175649 38404304 ~ 38417926 (+) True LOC120571098
XR_005641173.1 lncRNA upstream 198107 38392745 ~ 38395468 (+) True LOC120571083
TU188540 lncRNA downstream 145910 38740572 ~ 38743766 (+) True G139793
TU188553 lncRNA downstream 179653 38774315 ~ 38904273 (+) True G139803
TU188298 lncRNA downstream 214188 38808850 ~ 38833687 (+) False G139596
TU188300 lncRNA downstream 214188 38808850 ~ 38833687 (+) True G139596
TU188301 lncRNA downstream 214188 38808850 ~ 38918553 (+) False G139596
XM_039819760.1 mRNA upstream 38 38573821 ~ 38593537 (+) True LOC120571058
XM_039819754.1 mRNA upstream 128290 38463009 ~ 38465285 (+) True LOC120571053
XM_039819686.1 mRNA upstream 153085 38438672 ~ 38440490 (+) True LOC120571002
XM_039819758.1 mRNA upstream 252820 38338437 ~ 38340755 (+) True LOC120571056
XM_039819674.1 mRNA upstream 977088 37613121 ~ 37616487 (+) True LOC120570991
XM_039819744.1 mRNA downstream 17935 38612597 ~ 38614881 (+) True LOC120571044
XM_039819772.1 mRNA downstream 36127 38630789 ~ 38632013 (+) True LOC120571068
XM_039819689.1 mRNA downstream 50296 38644958 ~ 38667944 (+) True LOC120571004
XM_039819690.1 mRNA downstream 96316 38690978 ~ 38697555 (+) True LOC120571005
XM_039819691.1 mRNA downstream 103059 38697721 ~ 38706330 (+) True LOC120571006
TU188180 other upstream 163121 38426750 ~ 38430454 (+) True G139581
TU188274 other upstream 720451 37867909 ~ 37873124 (+) True G139586
TU187628 other upstream 1070443 37511709 ~ 37523132 (+) False LOC120570989
TU187637 other upstream 1146991 37443392 ~ 37446584 (+) True G139164
XR_005641164.1 other upstream 1182395 37400292 ~ 37411180 (+) False LOC120571062
TU188586 other downstream 343592 38938254 ~ 38942817 (+) False LOC120571012
TU188606 other downstream 378048 38972710 ~ 38999473 (+) False G139838
TU188607 other downstream 403859 38998521 ~ 38999473 (+) True G139838
TU188610 other downstream 403859 38998521 ~ 38999473 (+) False G139838
TU188611 other downstream 403859 38998521 ~ 38999473 (+) False G139838

Expression Profile