RNA id: TU188592


Basic Information

Item Value
RNA id TU188592
length 459
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id G139833
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 39122117 ~ 39126190 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtgtgtgtgtgtgtgtctgtgtgtgttggtgtgtgtgtctgtgtgttgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctatgtgtggtagctctgtgtgtgtgtgtgtgtggtgtctgtgtatgtgtatctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgaccgcTGTGTATGCCGATGCGTAGCCTCAGCTTCTGATTGGCTCGGTGTCTGATCCTGAAGTTCTGGACGGCGTCCAATAGGGCGAGAGACATGCGGGCCACCTCTCGGCCGTGCAGCTTCTCGTTCCTCACGGGCAGCCCGGACACCACCATGTAGGCATCGCCAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188659 lncRNA upstream 17537 39095934 ~ 39104580 (+) True G139864
TU188601 lncRNA upstream 44678 39010245 ~ 39077439 (+) True G139835
TU188665 lncRNA downstream 2829 39129019 ~ 39131098 (+) True G139866
TU188664 lncRNA downstream 37542 39163732 ~ 39180619 (+) False G139865
TU188662 lncRNA downstream 37792 39163982 ~ 39180619 (+) True G139865
TU188660 lncRNA downstream 53988 39180178 ~ 39180619 (+) False G139865
TU188663 lncRNA downstream 53988 39180178 ~ 39180619 (+) False G139865
XM_039819699.1 mRNA upstream 329 39053199 ~ 39121788 (+) True LOC120571016
XM_039820389.1 mRNA upstream 39895 39076716 ~ 39082222 (+) False LOC120571448
XM_039820387.1 mRNA upstream 41476 39076716 ~ 39080641 (+) True LOC120571448
XM_039819696.1 mRNA upstream 164548 38936746 ~ 38957569 (+) True LOC120571012
XM_039819691.1 mRNA upstream 415787 38697721 ~ 38706330 (+) True LOC120571006
XM_039819702.1 mRNA downstream 54645 39180835 ~ 39184378 (+) True LOC120571018
XM_039820390.1 mRNA downstream 65395 39191585 ~ 39192174 (+) True LOC120571450
XM_039819703.1 mRNA downstream 82648 39208838 ~ 39213480 (+) True LOC120571019
TU188647 other upstream 65250 39054771 ~ 39056867 (+) False G139856
TU188621 other upstream 106213 39012238 ~ 39015904 (+) True G139845
TU188607 other upstream 122644 38998521 ~ 38999473 (+) True G139838

Expression Profile