RNA id: TU188598


Basic Information

Item Value
RNA id TU188598
length 218
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G139834
representative False

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 38961663 ~ 39035152 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtatgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188602 lncRNA upstream 13707 38978489 ~ 39021114 (+) False G139835
TU188619 lncRNA upstream 26209 38995070 ~ 39008612 (+) False G139843
TU188618 lncRNA upstream 26209 39007980 ~ 39008612 (+) True G139843
TU188613 lncRNA upstream 48807 38979041 ~ 38986014 (+) False G139839
TU188612 lncRNA upstream 48807 38984824 ~ 38986014 (+) True G139839
TU188633 lncRNA downstream 8715 39043867 ~ 39064485 (+) True G139854
XR_005641230.1 lncRNA downstream 30932 39066084 ~ 39068090 (+) True LOC120571451
TU188659 lncRNA downstream 60782 39095934 ~ 39104580 (+) True G139864
TU188649 lncRNA downstream 75896 39111048 ~ 39133777 (+) True G139856
TU188592 lncRNA downstream 86965 39122117 ~ 39126190 (+) True G139833
XM_039819696.1 mRNA upstream 77252 38936746 ~ 38957569 (+) True LOC120571012
XM_039819691.1 mRNA upstream 328491 38697721 ~ 38706330 (+) True LOC120571006
XM_039819690.1 mRNA upstream 337266 38690978 ~ 38697555 (+) True LOC120571005
XM_039819689.1 mRNA upstream 366877 38644958 ~ 38667944 (+) True LOC120571004
XM_039819772.1 mRNA upstream 402808 38630789 ~ 38632013 (+) True LOC120571068
XM_039819699.1 mRNA downstream 18047 39053199 ~ 39121788 (+) True LOC120571016
XM_039820389.1 mRNA downstream 41564 39076716 ~ 39082222 (+) False LOC120571448
XM_039820387.1 mRNA downstream 41564 39076716 ~ 39080641 (+) True LOC120571448
XM_039819702.1 mRNA downstream 145683 39180835 ~ 39184378 (+) True LOC120571018
XM_039820390.1 mRNA downstream 156433 39191585 ~ 39192174 (+) True LOC120571450
TU188621 other upstream 18917 39012238 ~ 39015904 (+) True G139845
TU188606 other upstream 35348 38972710 ~ 38999473 (+) False G139838
TU188607 other upstream 35348 38998521 ~ 38999473 (+) True G139838
TU188610 other upstream 35348 38998521 ~ 38999473 (+) False G139838
TU188611 other upstream 35348 38998521 ~ 38999473 (+) False G139838
TU188647 other downstream 19619 39054771 ~ 39056867 (+) False G139856

Expression Profile