RNA id: TU188606


Basic Information

Item Value
RNA id TU188606
length 516
RNA type TUCP
GC content 0.69
exon number 2
gene id G139838
representative False

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 38972710 ~ 38999473 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGTTCTGGTCCTGgtcctggtcctggtcctggagGTCCCCCCCCGGTGCTGCCGGTCTGTTCCGGTGAAACAGGGACTCCCTCCGGCGGGTGCAGGGGCTCTCCGCCAGCACGGCGCCGAAGCCGTAGGGCGTGGTCACCTTGGCGACGTGCGTCAGCGACATGGCGGCGTGCGTGGTCAGGTCCGTGTCGGCGTGGGGGTCCAGCGGCGGCGCCCCTCGGGGGGTTCTGACCCGCGGCGGGCGGACCAGGAAGCCAGAAGGACTCGGCGCGGCCCGGTCTTCGGCGTCCGACAGCAGCCGGGTCCGGTCTGGCGAGCGGCGGCCGAGCCGCGGCGAGAAACGCAGCGGCGAGCTGCAGGACGGGATGATGAAGCTCGGGACTCTCTGGGGGGTCAGGACCAGAGAACGCAGACACGAGCCGGGCTTCAGCGCCGACATGGTGACCAGACCGGGCTCAGGTTAAAATCTGGGGAACCAAACGGTGATGAGGTCATGgctctaaaagtcctgatttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188579 lncRNA upstream 45779 38926703 ~ 38926931 (+) True G139825
TU188301 lncRNA upstream 54157 38808850 ~ 38918553 (+) False G139596
TU188327 lncRNA upstream 114469 38856226 ~ 38858241 (+) True G139611
TU188300 lncRNA upstream 139023 38808850 ~ 38833687 (+) True G139596
TU188618 lncRNA downstream 8507 39007980 ~ 39008612 (+) True G139843
TU188601 lncRNA downstream 10772 39010245 ~ 39077439 (+) True G139835
TU188598 lncRNA downstream 35348 39034821 ~ 39035152 (+) False G139834
TU188633 lncRNA downstream 44394 39043867 ~ 39064485 (+) True G139854
XR_005641230.1 lncRNA downstream 66611 39066084 ~ 39068090 (+) True LOC120571451
XM_039819696.1 mRNA upstream 15141 38936746 ~ 38957569 (+) True LOC120571012
XM_039819691.1 mRNA upstream 266380 38697721 ~ 38706330 (+) True LOC120571006
XM_039819690.1 mRNA upstream 275155 38690978 ~ 38697555 (+) True LOC120571005
XM_039819689.1 mRNA upstream 304766 38644958 ~ 38667944 (+) True LOC120571004
XM_039819772.1 mRNA upstream 340697 38630789 ~ 38632013 (+) True LOC120571068
XM_039819699.1 mRNA downstream 53726 39053199 ~ 39121788 (+) True LOC120571016
XM_039820389.1 mRNA downstream 77243 39076716 ~ 39082222 (+) False LOC120571448
XM_039820387.1 mRNA downstream 77243 39076716 ~ 39080641 (+) True LOC120571448
XM_039819702.1 mRNA downstream 181362 39180835 ~ 39184378 (+) True LOC120571018
XM_039820390.1 mRNA downstream 192112 39191585 ~ 39192174 (+) True LOC120571450
TU188586 other upstream 29893 38938254 ~ 38942817 (+) False LOC120571012
TU188294 other upstream 378048 38593575 ~ 38594662 (+) False G139594
TU188180 other upstream 542256 38426750 ~ 38430454 (+) True G139581
TU188274 other upstream 1099586 37867909 ~ 37873124 (+) True G139586
TU187628 other upstream 1449578 37511709 ~ 37523132 (+) False LOC120570989
TU188621 other downstream 12765 39012238 ~ 39015904 (+) True G139845
TU188647 other downstream 55298 39054771 ~ 39056867 (+) False G139856

Expression Profile