RNA id: TU188648


Basic Information

Item Value
RNA id TU188648
length 455
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G139856
representative False

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 39054771 ~ 39208169 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctctcacacacacacacacacacacagacaaatacacacacacacacagacacacacgcagaatacatggacacagacacgcacacacacacacacacacacacacacacacacagacacacacaaacagaaaacacacacacacagacacacacacacacacacacacacagccacacacacacacacacacacacacacagacacacacacacacacacactctctcacacacacatacacacacacagtcaaatacgcacacacacacagtcaaatacgcacacacacagaatacatggacacagacacacacacgcacacacacacattctcacacacacacacagccacacacacaacacacacacatggacacacacacactctcaaacacacacacgcacacacactcactctcacacacacacacacacacacacagacagacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188654 lncRNA upstream 116 39192920 ~ 39193770 (+) True G139859
TU188643 lncRNA upstream 1544 39191405 ~ 39192342 (+) False G139856
TU188677 lncRNA upstream 9358 39183294 ~ 39184528 (+) False LOC120571018
TU188662 lncRNA upstream 13267 39163982 ~ 39180619 (+) True G139865
XM_039820390.1 mRNA upstream 1712 39191585 ~ 39192174 (+) True LOC120571450
XM_039819702.1 mRNA upstream 9508 39180835 ~ 39184378 (+) True LOC120571018
XM_039819699.1 mRNA upstream 72098 39053199 ~ 39121788 (+) True LOC120571016
XM_039819703.1 mRNA downstream 669 39208838 ~ 39213480 (+) True LOC120571019
TU188647 other upstream 137019 39054771 ~ 39056867 (+) False G139856
TU188621 other upstream 177982 39012238 ~ 39015904 (+) True G139845
TU188607 other upstream 194413 38998521 ~ 38999473 (+) True G139838

Expression Profile