RNA id: TU188665


Basic Information

Item Value
RNA id TU188665
length 829
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G139866
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 39129019 ~ 39131098 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGCAGCGGCGTGCTCTCAGCCGATAGGGCGGTGAAGCCGATGATGTCACTGAAGTAAATGGTGACGGAGTCGAAGGCTTCGGCCTGGACCGTCTCGCCGCGTTTCAGCTGCTCGGCAACCGAACTGGAACAAAACGAGAGTATTATGGGCTATATTTACTAGTATTACAGCAGTATTATGCAGTGTATTTACTGAGATAGTATCCAGTATTACAGTagacaaaaaggcaacaaaatggTACTAGTATTACAGTAGTATTACAGTAGTATTACAGTAGTATTACAGTAGTATATGTGTATTACTGAGGTAGTATCTGGTAGAGCAGGGTCTCagccttcttcttctctttgtgATACTAGTATTACAGTAGTATTACAGTAGTATAAGTGTATTACTGAGGTAGTATCTGGTAGAGCAGGTTCTCagccttcttcttctcttcgtGATACTAGTATTACAGTAGTATTACAGTAGTATATGTGTATTACTGAGGTAGTATCTGGTAGAGCAGGGTCTCagccttcttcttctcttcgtGATACTAGTATTACAGTAGTATTACAGTAGTATTACAGTAGTATATGTGTATTACTGAGGTAGTATCTGGTAGAGCAGGGTCTCagccttcttcttctcttcgtGATACTAGTATTACAGTAGTATTACAGTAGTATATGTGTATTACTGAGGTAGTATCTGGTAGAGCAGGGTCTCagccttcttcttctcttcgtGATATGCGGCGGTTCTCTCCTCCACCAGCTCCTCCAGGTTGTTGGCGTACTGCTCCATCCGGGACAGCAAGTTATCCAGAATGTTAGAGCCATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188592 lncRNA upstream 2829 39122117 ~ 39126190 (+) True G139833
TU188659 lncRNA upstream 24439 39095934 ~ 39104580 (+) True G139864
TU188601 lncRNA upstream 51580 39010245 ~ 39077439 (+) True G139835
TU188664 lncRNA downstream 32634 39163732 ~ 39180619 (+) False G139865
TU188662 lncRNA downstream 32884 39163982 ~ 39180619 (+) True G139865
TU188660 lncRNA downstream 49080 39180178 ~ 39180619 (+) False G139865
TU188663 lncRNA downstream 49080 39180178 ~ 39180619 (+) False G139865
TU188677 lncRNA downstream 52196 39183294 ~ 39184528 (+) False LOC120571018
XM_039819699.1 mRNA upstream 7231 39053199 ~ 39121788 (+) True LOC120571016
XM_039820389.1 mRNA upstream 46797 39076716 ~ 39082222 (+) False LOC120571448
XM_039820387.1 mRNA upstream 48378 39076716 ~ 39080641 (+) True LOC120571448
XM_039819696.1 mRNA upstream 171450 38936746 ~ 38957569 (+) True LOC120571012
XM_039819691.1 mRNA upstream 422689 38697721 ~ 38706330 (+) True LOC120571006
XM_039819702.1 mRNA downstream 49737 39180835 ~ 39184378 (+) True LOC120571018
XM_039820390.1 mRNA downstream 60487 39191585 ~ 39192174 (+) True LOC120571450
XM_039819703.1 mRNA downstream 77740 39208838 ~ 39213480 (+) True LOC120571019
TU188647 other upstream 72152 39054771 ~ 39056867 (+) False G139856
TU188621 other upstream 113115 39012238 ~ 39015904 (+) True G139845
TU188607 other upstream 129546 38998521 ~ 38999473 (+) True G139838

Expression Profile