RNA id: XM_039819703.1


Basic Information

Item Value
RNA id XM_039819703.1
length 1021
RNA type mRNA
GC content 0.56
exon number 5
gene id LOC120571019
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 39207959 ~ 39213480 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CATCacttctgtttctgtctgtctgcttgcttgtctgtctgcctgtctgtctgtcaggtgAACTGGACGGAGTTCGTGTCCCGTAACGTCAGCGGCAGCCTGAAGGTGGAGCCGGAGAGCAGCGTCCTGTACAGCAGCGCCACGGTCTTCAGCAGGGTCAGAatctcttattttgaaaagctaCTCCCTGGGTCAGACACTCTTACTTTGAAAAGCTTCTCCCTGGGCTTCATCCTGCAGCGTCTGTGGTCCCCGGTCCCATCATTGGAGCTGCAGgcagtgggcggggcttatccTCCCAGCAGGGTGGAGGTCCACAGGTCCATCGACGACGAGTTCACACCCTCAATATTCAAGGTGACCCAGTGGCTGTCCTCGGAGAACGGCAGCGCCGAGGTTCTGGGGTACCTGCAGTGGAAGCCCGTGGCGTCCCGGGGGCGGGACTCGTCTGTGGAGAACGCCACGCCGTGTCACCACTCAGCGCCTCGGCCAATCAGCAGCGAGGACACGGCGAGGGCGTCCGGATTGGTCCGGGCCTTCTACGCAGAACCAGAACCACAGACGGTCGGACTCAACCTGAGCTTCGGACTCGCAGGAGACCCGTTCTACAACAGCACACGGTTCCTCCGCTGGACCGTGCTGATTGGCTCCGGCTCTCCTCCAGTCGAATCCTTCTCCCCGCTGGTCCTCGCCATCATGGCGGTCGGTCTGGGAACTCCCATGATCCTCCTGGTTCTGGGCGGAGCCTACGTCTGCGTCCGGAAGAGGGCGGCGGCCTCGGCGGCGGCGTTGGCCTACGTGCCAATCAACTGACGGAGGCGTTTTTTAAAGACTGTTGACGGACAGAAGAAACGTTTTGACATCTTTGGTTCCGTCTCGTGTTCTTAATGGAACCTCGTTGAGATAATGACTTTATTTAAATGATTATGTTAAAGGTACCCTCTCTGCTTATCGTTCCTCATGTTCaatgatttgtgtttttaagactttgACTTTGATTAAAGAATATTTGATTCATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188648 lncRNA upstream 669 39193886 ~ 39208169 (+) False G139856
TU188680 lncRNA upstream 1458 39206344 ~ 39207380 (+) True G139879
TU188654 lncRNA upstream 15068 39192920 ~ 39193770 (+) True G139859
TU188643 lncRNA upstream 16496 39191405 ~ 39192342 (+) False G139856
TU188677 lncRNA upstream 24310 39183294 ~ 39184528 (+) False LOC120571018
XM_039820390.1 mRNA upstream 16664 39191585 ~ 39192174 (+) True LOC120571450
XM_039819702.1 mRNA upstream 24460 39180835 ~ 39184378 (+) True LOC120571018
XM_039819699.1 mRNA upstream 87050 39053199 ~ 39121788 (+) True LOC120571016
XM_039820389.1 mRNA upstream 126616 39076716 ~ 39082222 (+) False LOC120571448
XM_039820387.1 mRNA upstream 128197 39076716 ~ 39080641 (+) True LOC120571448
TU188647 other upstream 151971 39054771 ~ 39056867 (+) False G139856
TU188621 other upstream 192934 39012238 ~ 39015904 (+) True G139845
TU188607 other upstream 209365 38998521 ~ 38999473 (+) True G139838

Expression Profile