RNA id: XM_039820387.1


Basic Information

Item Value
RNA id XM_039820387.1
length 734
RNA type mRNA
GC content 0.46
exon number 5
gene id LOC120571448
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 39076716 ~ 39082222 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gagtgtgtctgtctgtcagtctgtgtgttacTAGATGTGGTAATGCTGAGCCTCTCTGGGAGCTTCCTCTTTTTTCCTGTTTAAAGTTTACTTTCAATTTACACACTTTGTGACGCAGTTTGTTCCCTCCGTGTGAAGCTCCAGCTGAAGgacccagaccctgctgaacctgaacccagctgtgtccATGAAGAGAATGGAGAATGGAGACACCActactttactttaaaaaataaaaaagaagccaGCCTGAAATGGAGAGACCAACTAACATGGAGGAGGGGAGAAATAAAAGAGAGAGGCTACTTGAAATGACGAATAGAAGGGGGACCCAGCAGAGACcagaacctgaacctgaacctgaacctgaacctgtacctgaacctgaacctgaacctgaacccagctgtgtgtcctttaaGAGCGACCAGTCACATCAAGGCCTCATTCACATTAAAGGAGAGCAACCCTCGGCTGAAAAGAGGATCCATCAAAGACCAGACTCTGCtaaacctgaacccagctgtgtgtcctttaaGAGTGACCGGTCAAACGTTTGCCCCATTGACTTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGGAAGGAAGTCCAGCTGGAGTTTGTAAGCGTAAACTCAAATCTCACCTAAACAAGAAGTTCCAGTGTAggtttgaggggattgctaaagcaggaaaccaAACCGatctgaatcagatgttcacagagatctaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641230.1 lncRNA upstream 8626 39066084 ~ 39068090 (+) True LOC120571451
TU188633 lncRNA upstream 12231 39043867 ~ 39064485 (+) True G139854
TU188598 lncRNA upstream 41564 39034821 ~ 39035152 (+) False G139834
TU188619 lncRNA upstream 68104 38995070 ~ 39008612 (+) False G139843
TU188618 lncRNA upstream 68104 39007980 ~ 39008612 (+) True G139843
TU188659 lncRNA downstream 15293 39095934 ~ 39104580 (+) True G139864
TU188649 lncRNA downstream 30407 39111048 ~ 39133777 (+) True G139856
TU188592 lncRNA downstream 41476 39122117 ~ 39126190 (+) True G139833
TU188661 lncRNA downstream 44806 39125447 ~ 39180619 (+) False G139865
TU188665 lncRNA downstream 48378 39129019 ~ 39131098 (+) True G139866
XM_039819696.1 mRNA upstream 119147 38936746 ~ 38957569 (+) True LOC120571012
XM_039819691.1 mRNA upstream 370386 38697721 ~ 38706330 (+) True LOC120571006
XM_039819690.1 mRNA upstream 379161 38690978 ~ 38697555 (+) True LOC120571005
XM_039819689.1 mRNA upstream 408772 38644958 ~ 38667944 (+) True LOC120571004
XM_039819772.1 mRNA upstream 444703 38630789 ~ 38632013 (+) True LOC120571068
XM_039819702.1 mRNA downstream 100194 39180835 ~ 39184378 (+) True LOC120571018
XM_039820390.1 mRNA downstream 110944 39191585 ~ 39192174 (+) True LOC120571450
XM_039819703.1 mRNA downstream 128197 39208838 ~ 39213480 (+) True LOC120571019
TU188647 other upstream 19849 39054771 ~ 39056867 (+) False G139856
TU188621 other upstream 60812 39012238 ~ 39015904 (+) True G139845
TU188607 other upstream 77243 38998521 ~ 38999473 (+) True G139838

Expression Profile