RNA id: TU189156


Basic Information

Item Value
RNA id TU189156
length 221
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G140235
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 170753 ~ 170973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tggctgtaatgttttccattttggatgttgaagattaagaacaagactttcaaaggagttataatttaatttaggtttaggagtaattaacaggcttgcatcaaagatggctgcaactccccctcctcggcctgagcctctaggaatttgagtattaatatgactgggaggagtggcttcatttagactaacatagtcttcatggcccagccaggtttcag

Function

GO:

id name namespace
GO:0004690 cyclic nucleotide-dependent protein kinase activity molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189134 lncRNA upstream 3487 166954 ~ 167266 (+) True G140218
TU189133 lncRNA upstream 8085 162242 ~ 162668 (+) True G140217
TU189119 lncRNA upstream 125323 45061 ~ 45430 (+) True G140203
TU189182 lncRNA downstream 152333 323306 ~ 323708 (+) True G140261
TU189186 lncRNA downstream 191090 362063 ~ 362301 (+) True G140265
TU189192 lncRNA downstream 249921 420894 ~ 421514 (+) True G140271
TU189207 lncRNA downstream 332488 503461 ~ 503732 (+) True G140286
TU189214 lncRNA downstream 393328 564301 ~ 564877 (+) True G140292
XM_039823563.1 mRNA upstream 100087 69341 ~ 70666 (+) True LOC120573670
XM_039823280.1 mRNA downstream 143046 314019 ~ 315451 (+) True LOC120573509
XM_039823429.1 mRNA downstream 372156 543129 ~ 544442 (+) True LOC120573607
XM_039823288.1 mRNA downstream 577671 748644 ~ 751655 (+) True LOC120573513
XM_039823566.1 mRNA downstream 619885 790858 ~ 793879 (+) True LOC120573672
XM_039823565.1 mRNA downstream 641570 812543 ~ 815209 (+) True LOC120573671
TU189184 other downstream 164909 335882 ~ 336176 (+) True G140263
TU189223 other downstream 450143 621116 ~ 622589 (+) False LOC120572292
TU189470 other downstream 1547366 1718339 ~ 1725468 (+) False frem1a
TU189594 other downstream 1851124 2022097 ~ 2030627 (+) False G140582
TU189616 other downstream 1851619 2022592 ~ 2032225 (+) True G140594

Expression Profile