Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU189455 |
| length | 232 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G140492 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 1663021 ~ 1663252 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU189451 | lncRNA | downstream | 23410 | 1623259 ~ 1639611 (-) | True | tspan5a |
| TU189407 | lncRNA | downstream | 132071 | 1530235 ~ 1530950 (-) | True | G140454 |
| TU189404 | lncRNA | downstream | 141182 | 1519821 ~ 1521839 (-) | True | G140451 |
| TU189390 | lncRNA | downstream | 177722 | 1482802 ~ 1485299 (-) | False | tada2b |
| TU189389 | lncRNA | downstream | 180316 | 1481738 ~ 1482705 (-) | True | G140437 |
| TU189483 | lncRNA | upstream | 56673 | 1719925 ~ 1725333 (-) | True | G140514 |
| XR_005641667.1 | lncRNA | upstream | 112585 | 1775837 ~ 1779726 (-) | False | LOC120573239 |
| TU189515 | lncRNA | upstream | 112689 | 1775941 ~ 1782596 (-) | True | LOC120573239 |
| TU189518 | lncRNA | upstream | 124052 | 1787304 ~ 1788089 (-) | False | G140534 |
| TU189519 | lncRNA | upstream | 124052 | 1787304 ~ 1788089 (-) | True | G140534 |
| XM_039823279.1 | mRNA | downstream | 2009 | 1660137 ~ 1661012 (-) | False | LOC120573508 |
| XM_039823148.1 | mRNA | downstream | 13589 | 1625891 ~ 1649432 (-) | False | tspan5a |
| XM_039823147.1 | mRNA | downstream | 13589 | 1625891 ~ 1649432 (-) | False | tspan5a |
| XM_039823242.1 | mRNA | downstream | 88897 | 1550528 ~ 1574124 (-) | True | slc1a1 |
| XM_039822938.1 | mRNA | downstream | 162705 | 1492274 ~ 1500316 (-) | True | LOC120573289 |
| XM_039822828.1 | mRNA | upstream | 86267 | 1749519 ~ 1774918 (-) | False | aco1 |
| XM_039822829.1 | mRNA | upstream | 86267 | 1749519 ~ 1774892 (-) | True | aco1 |
| XM_039823219.1 | mRNA | upstream | 220650 | 1883902 ~ 1885687 (-) | True | LOC120573473 |
| XM_039821465.1 | mRNA | upstream | 356360 | 2019612 ~ 2022367 (-) | True | LOC120572242 |
| XM_039823313.1 | mRNA | upstream | 359767 | 2023019 ~ 2032506 (-) | False | LOC120573528 |
| TU189195 | other | downstream | 1211351 | 443550 ~ 451670 (-) | True | G140274 |
| unassigned_transcript_680 | other | downstream | 1235537 | 427403 ~ 427484 (-) | True | trnal-aag_5 |
| unassigned_transcript_679 | other | downstream | 1244015 | 418935 ~ 419006 (-) | True | trnam-cau_42 |
| unassigned_transcript_678 | other | downstream | 1245940 | 417010 ~ 417081 (-) | True | trnam-cau_41 |
| unassigned_transcript_677 | other | downstream | 1247153 | 415797 ~ 415868 (-) | True | trnam-cau_40 |
| TU189682 | other | upstream | 388229 | 2051481 ~ 2058191 (-) | True | G140615 |
| TU190151 | other | upstream | 2491672 | 4154924 ~ 4155547 (-) | True | G141003 |
| TU190189 | other | upstream | 2611399 | 4274651 ~ 4275274 (-) | True | G141027 |
| TU190191 | other | upstream | 2611399 | 4274651 ~ 4275274 (-) | False | G141027 |
| TU190193 | other | upstream | 2611399 | 4274651 ~ 4275274 (-) | False | G141027 |
