Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU189644 |
| length | 534 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | LOC120573528 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 1927132 ~ 2032506 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU189636 | lncRNA | downstream | 965 | 1929602 ~ 1933512 (-) | False | LOC120573528 |
| TU189640 | lncRNA | downstream | 1881 | 1927132 ~ 1932596 (-) | False | LOC120573528 |
| TU189623 | lncRNA | downstream | 4959 | 1928405 ~ 1929518 (-) | False | LOC120573528 |
| TU189656 | lncRNA | downstream | 25833 | 1907245 ~ 1908644 (-) | True | G140601 |
| TU189619 | lncRNA | downstream | 29210 | 1901027 ~ 1905267 (-) | True | G140597 |
| XR_005641429.1 | lncRNA | upstream | 1441 | 1938467 ~ 1941368 (-) | True | LOC120572355 |
| TU189658 | lncRNA | upstream | 22618 | 1959644 ~ 1963832 (-) | True | G140603 |
| XR_005641417.1 | lncRNA | upstream | 29581 | 1966607 ~ 1967650 (-) | True | LOC120572308 |
| TU189687 | lncRNA | upstream | 119263 | 2056289 ~ 2059027 (-) | True | G140619 |
| XR_005641376.1 | lncRNA | upstream | 145639 | 2082665 ~ 2085669 (-) | True | LOC120572143 |
| XM_039823219.1 | mRNA | downstream | 48790 | 1883902 ~ 1885687 (-) | True | LOC120573473 |
| XM_039822828.1 | mRNA | downstream | 159559 | 1749519 ~ 1774918 (-) | False | aco1 |
| XM_039822829.1 | mRNA | downstream | 159585 | 1749519 ~ 1774892 (-) | True | aco1 |
| XM_039823278.1 | mRNA | downstream | 269532 | 1660137 ~ 1664945 (-) | True | LOC120573508 |
| XM_039821465.1 | mRNA | upstream | 82586 | 2019612 ~ 2022367 (-) | True | LOC120572242 |
| XM_039823313.1 | mRNA | upstream | 85993 | 2023019 ~ 2032506 (-) | False | LOC120573528 |
| XM_039821762.1 | mRNA | upstream | 517041 | 2454067 ~ 2573483 (-) | False | camk2d1 |
| XM_039821757.1 | mRNA | upstream | 517041 | 2454067 ~ 2573483 (-) | True | camk2d1 |
| XM_039821763.1 | mRNA | upstream | 517041 | 2454067 ~ 2573483 (-) | False | camk2d1 |
| TU189195 | other | downstream | 1482807 | 443550 ~ 451670 (-) | True | G140274 |
| unassigned_transcript_680 | other | downstream | 1506993 | 427403 ~ 427484 (-) | True | trnal-aag_5 |
| unassigned_transcript_679 | other | downstream | 1515471 | 418935 ~ 419006 (-) | True | trnam-cau_42 |
| unassigned_transcript_678 | other | downstream | 1517396 | 417010 ~ 417081 (-) | True | trnam-cau_41 |
| unassigned_transcript_677 | other | downstream | 1518609 | 415797 ~ 415868 (-) | True | trnam-cau_40 |
| TU189682 | other | upstream | 114455 | 2051481 ~ 2058191 (-) | True | G140615 |
| TU190151 | other | upstream | 2217898 | 4154924 ~ 4155547 (-) | True | G141003 |
| TU190189 | other | upstream | 2337625 | 4274651 ~ 4275274 (-) | True | G141027 |
| TU190191 | other | upstream | 2337625 | 4274651 ~ 4275274 (-) | False | G141027 |
| TU190193 | other | upstream | 2337625 | 4274651 ~ 4275274 (-) | False | G141027 |
