RNA id: TU189666


Basic Information

Item Value
RNA id TU189666
length 293
lncRNA type intronic
GC content 0.41
exon number 3
gene id G140608
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2061131 ~ 2070512 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtttgaagggttctctcacactgtctctcactaatcaggtgtggggattaatgatcaaagagatgctttataaatactaaaggaacaatgtttgtctgttctgaagatagcgcagtggttatggcacatggctagggtgtggggggcccgggttcaaatcccactgtgccatatcaatcagtgtgtccctggctaaggtgttatttgacttttccactacttcaacttatttttacggttttaagctattcatccagtttagctttagcaattcagctattcatgttttattt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189597 lncRNA upstream 34909 1929623 ~ 2026222 (+) True G140582
TU189608 lncRNA upstream 37248 1937849 ~ 2023883 (+) True G140587
TU189590 lncRNA upstream 76583 1902652 ~ 1984548 (+) True G140578
TU189607 lncRNA upstream 123483 1933298 ~ 1937648 (+) True G140586
TU189604 lncRNA upstream 124107 1932222 ~ 1937024 (+) True G140584
TU189703 lncRNA downstream 83852 2154364 ~ 2154765 (+) True G140635
TU189708 lncRNA downstream 95724 2166236 ~ 2214162 (+) True G140640
XR_005641450.1 lncRNA downstream 224229 2294741 ~ 2295714 (+) True LOC120572447
TU189718 lncRNA downstream 264442 2334954 ~ 2335560 (+) True G140650
TU189705 lncRNA downstream 381965 2452477 ~ 2453646 (+) True G140637
XM_039822827.1 mRNA upstream 318762 1739323 ~ 1742369 (+) True paqr9
XM_039822823.1 mRNA upstream 338527 1677212 ~ 1722604 (+) False frem1a
XM_039822822.1 mRNA upstream 338548 1677212 ~ 1722583 (+) True frem1a
XM_039822824.1 mRNA upstream 338548 1677212 ~ 1722583 (+) False frem1a
XM_039822826.1 mRNA upstream 363083 1677210 ~ 1698048 (+) False frem1a
XM_039821755.1 mRNA downstream 139696 2210208 ~ 2210559 (+) True LOC120572444
XM_039821740.1 mRNA downstream 208422 2278934 ~ 2450242 (+) False ank2b
XM_039821745.1 mRNA downstream 242974 2313486 ~ 2450242 (+) False ank2b
XM_039821738.1 mRNA downstream 257723 2328235 ~ 2450242 (+) True ank2b
XM_039821743.1 mRNA downstream 284513 2355025 ~ 2450242 (+) False ank2b
TU189672 other upstream 1764 2055439 ~ 2059367 (+) True G140613
TU189616 other upstream 28906 2022592 ~ 2032225 (+) True G140594
TU189594 other upstream 30504 2022097 ~ 2030627 (+) False G140582
TU189470 other upstream 335663 1718339 ~ 1725468 (+) False frem1a
TU189223 other upstream 1438542 621116 ~ 622589 (+) False LOC120572292
TU189860 other downstream 757540 2828052 ~ 2903571 (+) False ablim2
TU189858 other downstream 787243 2857755 ~ 2903571 (+) False ablim2
TU189948 other downstream 1186039 3256551 ~ 3304631 (+) False mllt3
TU190185 other downstream 2242647 4313159 ~ 4315538 (+) False zgc:112271
TU190186 other downstream 2242854 4313366 ~ 4315538 (+) False zgc:112271

Expression Profile