Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU194197 |
| length | 408 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 3 |
| gene id | smim20 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 17852371 ~ 17853837 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194173 | lncRNA | downstream | 88694 | 17762380 ~ 17763705 (-) | True | G143898 |
| XR_005641723.1 | lncRNA | downstream | 167446 | 17682075 ~ 17684953 (-) | False | LOC120573415 |
| XR_005641722.1 | lncRNA | downstream | 167446 | 17682075 ~ 17684953 (-) | False | LOC120573415 |
| XR_005641724.1 | lncRNA | downstream | 167538 | 17682075 ~ 17684861 (-) | True | LOC120573415 |
| TU194119 | lncRNA | downstream | 604766 | 17247376 ~ 17247633 (-) | True | G143852 |
| TU194329 | lncRNA | upstream | 33464 | 17887278 ~ 17889652 (-) | True | G144013 |
| TU194348 | lncRNA | upstream | 120085 | 17973899 ~ 18060553 (-) | False | LOC120573700 |
| XR_005641476.1 | lncRNA | upstream | 138331 | 17992145 ~ 18002471 (-) | True | LOC120572704 |
| TU194367 | lncRNA | upstream | 162435 | 18016249 ~ 18019306 (-) | True | G144037 |
| TU194570 | lncRNA | upstream | 315479 | 18169293 ~ 18173021 (-) | False | mrpl52 |
| XM_039822623.1 | mRNA | downstream | 31321 | 17764186 ~ 17821078 (-) | False | rbpjb |
| XM_039822624.1 | mRNA | downstream | 62043 | 17766290 ~ 17790356 (-) | False | rbpjb |
| XM_039822625.1 | mRNA | downstream | 62307 | 17764186 ~ 17790092 (-) | False | rbpjb |
| XM_039822626.1 | mRNA | downstream | 73666 | 17764186 ~ 17778733 (-) | True | rbpjb |
| XM_039821851.1 | mRNA | downstream | 99384 | 17734332 ~ 17753015 (-) | True | tbc1d19 |
| XM_039823201.1 | mRNA | upstream | 11017 | 17864831 ~ 17870686 (-) | True | si:dkey-19b23.8 |
| XM_039823435.1 | mRNA | upstream | 52286 | 17906100 ~ 17949655 (-) | False | chd3 |
| XM_039823436.1 | mRNA | upstream | 58174 | 17911988 ~ 17949657 (-) | False | chd3 |
| XM_039823434.1 | mRNA | upstream | 58174 | 17911988 ~ 17949657 (-) | False | chd3 |
| XM_039823431.1 | mRNA | upstream | 58174 | 17911988 ~ 17949657 (-) | True | chd3 |
| XR_005641649.1 | other | downstream | 31322 | 17766500 ~ 17821077 (-) | False | rbpjb |
| TU194183 | other | downstream | 99410 | 17744954 ~ 17752989 (-) | False | tbc1d19 |
| TU194121 | other | downstream | 602845 | 17247951 ~ 17249554 (-) | False | LOC120572513 |
| TU194122 | other | downstream | 602845 | 17248088 ~ 17249554 (-) | False | LOC120572513 |
| XR_005641408.1 | other | downstream | 1809080 | 16019657 ~ 16043319 (-) | True | acap1 |
| TU194343 | other | upstream | 206378 | 18060192 ~ 18061155 (-) | False | LOC120573700 |
| TU194399 | other | upstream | 260038 | 18113852 ~ 18123690 (-) | True | G144058 |
| TU194667 | other | upstream | 741288 | 18595102 ~ 18597231 (-) | True | G144258 |
| unassigned_transcript_702 | other | upstream | 840885 | 18694699 ~ 18694772 (-) | True | trnan-guu_11 |
| unassigned_transcript_703 | other | upstream | 842282 | 18696096 ~ 18696169 (-) | True | trnan-guu_12 |
