RNA id: TU195755



Basic Information


Item Value
RNA id TU195755
length 656
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G145076
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 20931066 ~ 20931721 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AACTTAACTTGTATAGCTACCTGTAAATTATTGCAGACAAAATGGTGTGAGAGGCACATTGGTAGTTGTGGATAGTTGTTTTATCACCAGCTGTGGGGGTGGATGTCATTTTACACCGCTAGAATAATACTAAACCAATCCCTGCAATATTCTATACActcaattttatatatttttttaaaacgtaTTTTAACTCTGATGTCGTCATGATCGTAGCTTTGAGCCTAAGATTATATTTGGATGAAGAAACTGTGCTTCAGGAGGGGCGATCAAACCAAAAGATGAAGATGAGCAAGTACATTTCTCATCCATATCTCTTGTGACCAACCATCAGATCCTCATTCTGGCCACTCAAAGGCAGGTTTTGACATAGTTCACGATACTGATATACAGTCAacttatttgtatttatatatgtacattttaaGACCTCAATGCTGAATTCTGCCCATGTTTCTGTATCAAAGTATTTCTCCAGTCAAAGAATAAAAAATCTAAGAAACTGTTGGTCTTTAAAGTGTTTCCACGGTAGTCTCTGCGtctctgtatttctgtattACTTATTTCAGTTTTCCCTGTCCTGAAATCAGAAGATTAAAATCGTTTCAAATCTAGAAAATTGGAAGTATACTACTTGAAAGAGTGACTATGATGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU195688 lncRNA downstream 63978 20864825 ~ 20867088 (-) False nop10
TU195686 lncRNA downstream 85813 20843574 ~ 20845253 (-) True G145023
XR_005641691.1 lncRNA downstream 144677 20783569 ~ 20786389 (-) True LOC120573348
TU195639 lncRNA downstream 220293 20679910 ~ 20710773 (-) True G144996
TU195641 lncRNA downstream 220293 20682366 ~ 20710773 (-) False G144996
TU195827 lncRNA upstream 44934 20976655 ~ 20978016 (-) True G145112
TU195809 lncRNA upstream 124103 21055824 ~ 21057799 (-) True G145106
TU195810 lncRNA upstream 168428 21100149 ~ 21100806 (-) False G145106
TU195863 lncRNA upstream 227181 21158902 ~ 21161476 (-) True G145141
TU195936 lncRNA upstream 500004 21431725 ~ 21437860 (-) False si:dkey-172j4.3
XM_039822682.1 mRNA downstream 1507 20906455 ~ 20929559 (-) True LOC120573168
XM_039822683.1 mRNA downstream 1507 20907166 ~ 20929559 (-) False LOC120573168
XM_039822685.1 mRNA downstream 25525 20893966 ~ 20905541 (-) True si:cabz01101003.1
XM_039823533.1 mRNA downstream 38232 20887610 ~ 20892834 (-) True emc4
XM_039823534.1 mRNA downstream 38233 20887610 ~ 20892833 (-) False emc4
XM_039822648.1 mRNA upstream 2797 20934518 ~ 20946982 (-) True khnyn
XM_039821558.1 mRNA upstream 31987 20963708 ~ 20969411 (-) False si:dkeyp-74b6.2
XM_039821557.1 mRNA upstream 31987 20963708 ~ 20969395 (-) True si:dkeyp-74b6.2
XM_039822497.1 mRNA upstream 113835 21045556 ~ 21050288 (-) True LOC120573065
XM_039822498.1 mRNA upstream 133447 21065168 ~ 21070082 (-) True LOC120573066
TU195751 other downstream 13891 20915641 ~ 20917175 (-) False LOC120573168
XR_005641682.1 other downstream 67177 20827283 ~ 20863889 (-) False LOC120573300
TU195325 other downstream 1133536 19776680 ~ 19797530 (-) True G144730
XR_005641381.1 other downstream 1265274 19657083 ~ 19665792 (-) True si:cabz01074946.1
TU194942 other downstream 1577774 19350510 ~ 19353292 (-) False LOC120572670
TU195934 other upstream 432261 21363982 ~ 21367646 (-) False si:dkey-172j4.3
TU195935 other upstream 450545 21382266 ~ 21393483 (-) False si:dkey-172j4.3
TU195937 other upstream 472134 21403855 ~ 21434195 (-) True G145209
TU196042 other upstream 953034 21884755 ~ 21890072 (-) False ccnb3
TU196043 other upstream 953034 21884755 ~ 21890072 (-) False ccnb3

Expression Profile