RNA id: TU195937



Basic Information


Item Value
RNA id TU195937
length 757
RNA type TUCP
GC content 0.44
exon number 2
gene id G145209
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 21403855 ~ 21434195 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactacaaatctacgaagacccggccgtccctctaaactttcagctcatacaatgagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatactgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccaaaagccacctgggagacaccccaaacatgtggaagaaggtgctgtggtcagatgaaaccaaaatcgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgaaccaaaacataaagcaaaatctacaatggaatggttcacaaataaacatatccaggtgttagaatggccaagtcaaagtccagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU195863 lncRNA downstream 242379 21158902 ~ 21161476 (-) True G145141
TU195810 lncRNA downstream 303049 21100149 ~ 21100806 (-) False G145106
TU195809 lncRNA downstream 346056 21055824 ~ 21057799 (-) True G145106
TU195827 lncRNA downstream 425839 20976655 ~ 20978016 (-) True G145112
TU195755 lncRNA downstream 472134 20931066 ~ 20931721 (-) True G145076
TU195944 lncRNA upstream 41188 21475383 ~ 21479973 (-) True G145213
TU196111 lncRNA upstream 608231 22042426 ~ 22042693 (-) True G145330
TU196108 lncRNA upstream 644939 22079134 ~ 22079491 (-) True G145327
TU196105 lncRNA upstream 713383 22147578 ~ 22153086 (-) True G145325
TU196115 lncRNA upstream 721215 22155410 ~ 22155707 (-) True G145334
XM_039822112.1 mRNA downstream 10349 21351242 ~ 21393506 (-) False si:dkey-172j4.3
XM_039822776.1 mRNA downstream 219398 21167499 ~ 21184457 (-) True rab39bb
XM_039821863.1 mRNA downstream 271305 21131568 ~ 21132550 (-) True LOC120572532
XM_039821423.1 mRNA downstream 276786 21120201 ~ 21127069 (-) True LOC120572218
XM_039822498.1 mRNA downstream 333773 21065168 ~ 21070082 (-) True LOC120573066
XM_039822963.1 mRNA upstream 54437 21488632 ~ 21534404 (-) True zgc:109889
XM_039823360.1 mRNA upstream 102952 21537147 ~ 21683352 (-) False htr2cl1
XM_039823359.1 mRNA upstream 102952 21537147 ~ 21683352 (-) False htr2cl1
XM_039823361.1 mRNA upstream 102952 21537147 ~ 21683352 (-) False htr2cl1
XM_039823358.1 mRNA upstream 102952 21537147 ~ 21683352 (-) True htr2cl1
TU195935 other downstream 10372 21382266 ~ 21393483 (-) False si:dkey-172j4.3
TU195934 other downstream 36209 21363982 ~ 21367646 (-) False si:dkey-172j4.3
TU195751 other downstream 486680 20915641 ~ 20917175 (-) False LOC120573168
XR_005641682.1 other downstream 539966 20827283 ~ 20863889 (-) False LOC120573300
TU195325 other downstream 1606325 19776680 ~ 19797530 (-) True G144730
TU196042 other upstream 450560 21884755 ~ 21890072 (-) False ccnb3
TU196043 other upstream 450560 21884755 ~ 21890072 (-) False ccnb3
TU196044 other upstream 450560 21884755 ~ 21890072 (-) False ccnb3
TU196045 other upstream 450560 21884755 ~ 21979426 (-) True ccnb3
TU196109 other upstream 660712 22094907 ~ 22126460 (-) False shroom4

Expression Profile