RNA id: TU201802


Basic Information

Item Value
RNA id TU201802
length 255
lncRNA type read_through
GC content 0.37
exon number 2
gene id G149229
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35793631 ~ 36230609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGTCAGTCTTAGTAACTCAAAACGGTGGAATAGAGGTTTGGTGGGGGAATTTATCTCTGACCAAGACAGAGCCCGTATGACTTTCTTTTGCAAAGATATAAGTTTTTTAAGATGGCTGGTGAAAGTGTTACACCATATCACATTGCAATAGTTAAGGTGTGGTTCAAAGAGAGTTTTATACAATGTGAGAAGGGCAGACAGAGGAAGAAAATGTCTGATCTTATAAAACAAGCCAATATACTTGGACAATTTATT

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641573.1 lncRNA upstream 114092 35678806 ~ 35679539 (+) True LOC120572998
TU201762 lncRNA upstream 114478 35678849 ~ 35679153 (+) False LOC120572998
TU201722 lncRNA upstream 241689 35493204 ~ 35551942 (+) True G149184
TU201716 lncRNA upstream 333697 35459376 ~ 35459934 (+) True G149180
TU201703 lncRNA upstream 364588 35426249 ~ 35429043 (+) False G149172
XR_005641519.1 lncRNA downstream 68751 36299360 ~ 36305247 (+) True LOC120572955
TU201787 lncRNA downstream 137791 36368400 ~ 36376886 (+) True G149216
TU201855 lncRNA downstream 156007 36386616 ~ 36388121 (+) True G149274
TU201857 lncRNA downstream 156007 36386616 ~ 36387723 (+) False G149274
TU201859 lncRNA downstream 157644 36388253 ~ 36388706 (+) True G149275
XM_039823253.1 mRNA upstream 117987 35653002 ~ 35675644 (+) True LOC120573495
XM_039823252.1 mRNA upstream 219363 35560450 ~ 35574268 (+) True LOC120573494
XM_039822452.1 mRNA upstream 317973 35467836 ~ 35475658 (+) True LOC120572927
XM_039822210.1 mRNA upstream 464411 35324383 ~ 35329220 (+) True LOC120572777
XM_039822229.1 mRNA upstream 478212 35290137 ~ 35315419 (+) False LOC120572790
XM_039822404.1 mRNA downstream 109022 36339631 ~ 36343826 (+) True LOC120572889
XM_039821956.1 mRNA downstream 140270 36370879 ~ 36401016 (+) True LOC120572637
XM_039822353.1 mRNA downstream 190226 36420835 ~ 36427296 (+) True LOC120572853
XM_039822350.1 mRNA downstream 213890 36444499 ~ 36453193 (+) True LOC120572851
XM_039822261.1 mRNA downstream 233852 36464461 ~ 36476242 (+) False LOC120572806
TU201707 other upstream 364588 35426249 ~ 35429043 (+) False G149172
TU201639 other upstream 507897 35262223 ~ 35285734 (+) False LOC120572790
XR_005641493.1 other upstream 508076 35262298 ~ 35285555 (+) False LOC120572790
TU201612 other upstream 651145 35136144 ~ 35142486 (+) True G149095
TU201613 other upstream 665428 35122722 ~ 35128203 (+) True G149096
TU201846 other downstream 109039 36339648 ~ 36343578 (+) False LOC120572889
TU201847 other downstream 109039 36339648 ~ 36343478 (+) False LOC120572889
TU202320 other downstream 706797 36937406 ~ 36938142 (+) True G149584
TU202405 other downstream 1120466 37351075 ~ 37351844 (+) True G149657
TU202419 other downstream 1337304 37567913 ~ 37570708 (+) True G149671

Expression Profile