RNA id: TU201847


Basic Information

Item Value
RNA id TU201847
length 386
RNA type TUCP
GC content 0.52
exon number 3
gene id LOC120572889
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 36339631 ~ 36343826 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGAGGACACATCTCTACTCTGGCTGCTCTTTCTGACCTCACTGCTGAGCTGCCCAACAAACCAAGtctctctgactgtgagacccagcagctctcagatgtttaaaggacagtctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCTACATGGCCCCATCGGACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcaccatcactgtcactggtaagatcagactgtggagtcagtattgatgaagctgtgtgtgaatggatgacatgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU201782 lncRNA upstream 20912 35898112 ~ 36318736 (+) True G149212
XR_005641519.1 lncRNA upstream 34401 36299360 ~ 36305247 (+) True LOC120572955
XR_005641575.1 lncRNA upstream 107653 36224182 ~ 36231995 (+) True LOC120573000
TU201831 lncRNA upstream 125960 36171657 ~ 36213688 (+) True G149256
TU201778 lncRNA upstream 145207 35898112 ~ 36194441 (+) False G149212
TU201787 lncRNA downstream 24922 36368400 ~ 36376886 (+) True G149216
TU201855 lncRNA downstream 43138 36386616 ~ 36388121 (+) True G149274
TU201857 lncRNA downstream 43138 36386616 ~ 36387723 (+) False G149274
TU201859 lncRNA downstream 44775 36388253 ~ 36388706 (+) True G149275
TU201864 lncRNA downstream 121848 36465326 ~ 36467797 (+) False LOC120572806
XM_039822343.1 mRNA upstream 209545 36117298 ~ 36130103 (+) True LOC120572849
XM_039822374.1 mRNA upstream 519201 35815893 ~ 35820447 (+) True LOC120572867
XM_039822478.1 mRNA upstream 537715 35799725 ~ 35801933 (+) True LOC120572944
XM_039823253.1 mRNA upstream 664004 35653002 ~ 35675644 (+) True LOC120573495
XM_039823252.1 mRNA upstream 765380 35560450 ~ 35574268 (+) True LOC120573494
XM_039821956.1 mRNA downstream 27401 36370879 ~ 36401016 (+) True LOC120572637
XM_039822353.1 mRNA downstream 77357 36420835 ~ 36427296 (+) True LOC120572853
XM_039822350.1 mRNA downstream 101021 36444499 ~ 36453193 (+) True LOC120572851
XM_039822261.1 mRNA downstream 120983 36464461 ~ 36476242 (+) False LOC120572806
XM_039822260.1 mRNA downstream 121010 36464488 ~ 36476242 (+) False LOC120572806
TU201730 other upstream 77276 36122706 ~ 36262372 (+) False G149187
TU201726 other upstream 87625 35788119 ~ 36252023 (+) True G149187
XR_005641500.1 other upstream 216930 36117298 ~ 36122718 (+) False LOC120572849
TU201707 other upstream 910605 35426249 ~ 35429043 (+) False G149172
XR_005641493.1 other upstream 1054093 35262298 ~ 35285555 (+) False LOC120572790
TU202320 other downstream 593928 36937406 ~ 36938142 (+) True G149584
TU202405 other downstream 1007597 37351075 ~ 37351844 (+) True G149657
TU202419 other downstream 1224435 37567913 ~ 37570708 (+) True G149671
TU202665 other downstream 1333517 37676995 ~ 37681109 (+) True G149843
TU202667 other downstream 1333517 37676995 ~ 37681109 (+) False G149843

Expression Profile