RNA id: TU202402


Basic Information

Item Value
RNA id TU202402
length 271
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G149656
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37350467 ~ 37350876 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacagcccacctccagtcCGTAGGCTAGACCATCACATACATGAGTTCCTCGAATACTTTTGGGAAACCCTACCTGCCCAGTCTCTGAATCGCGATGGATGTGGGAATACAAGACTCTTGGAGACTGACGACTGGCTGGAGAGGTGTCTGGAGCTGCAGGCGGCCAGCAAGCCACCAAACCAGCTGGTTCTTTTCACGACTGGGAAAGGCCCATGCTAAAACTTATTGCACCACCTGCAGGTAGCGTGGGCGGACATGGGCCTTAAAGGG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202393 lncRNA upstream 77975 37271894 ~ 37272492 (+) True G149647
TU202390 lncRNA upstream 80471 37269249 ~ 37269996 (+) True G149646
TU202391 lncRNA upstream 80471 37269496 ~ 37269996 (+) False G149646
TU202392 lncRNA upstream 80838 37269249 ~ 37269629 (+) False G149646
TU202309 lncRNA upstream 201971 37146083 ~ 37148496 (+) True G149573
TU202408 lncRNA downstream 59564 37410440 ~ 37431835 (+) True G149660
TU202414 lncRNA downstream 105182 37456058 ~ 37456289 (+) True G149666
TU202650 lncRNA downstream 281781 37632657 ~ 37632882 (+) True G149833
TU202653 lncRNA downstream 285149 37636025 ~ 37670638 (+) True G149835
TU202654 lncRNA downstream 285324 37636200 ~ 37670638 (+) False G149835
XM_039821966.1 mRNA upstream 68075 37270290 ~ 37282392 (+) True LOC120572648
XM_039823026.1 mRNA upstream 113951 37210060 ~ 37236516 (+) True LOC120573338
XM_039823029.1 mRNA upstream 205291 37126197 ~ 37145176 (+) True LOC120573342
XM_039821963.1 mRNA upstream 229380 37101576 ~ 37121087 (+) True LOC120572645
XM_039823028.1 mRNA upstream 248868 37096912 ~ 37101599 (+) True LOC120573341
XM_039823027.1 mRNA downstream 36172 37387048 ~ 37412697 (+) True LOC120573339
XM_039821969.1 mRNA downstream 123592 37474468 ~ 37502157 (+) True LOC120572651
XM_039823031.1 mRNA downstream 182399 37533275 ~ 37558146 (+) True LOC120573344
XM_039823030.1 mRNA downstream 182399 37533275 ~ 37558146 (+) False LOC120573344
XM_039823032.1 mRNA downstream 182399 37533275 ~ 37558146 (+) False LOC120573344
TU202320 other upstream 412325 36937406 ~ 36938142 (+) True G149584
TU201846 other upstream 1006889 36339648 ~ 36343578 (+) False LOC120572889
TU201847 other upstream 1006989 36339648 ~ 36343478 (+) False LOC120572889
TU201730 other upstream 1088095 36122706 ~ 36262372 (+) False G149187
XR_005641500.1 other upstream 1227749 36117298 ~ 36122718 (+) False LOC120572849
TU202405 other downstream 199 37351075 ~ 37351844 (+) True G149657
TU202419 other downstream 217037 37567913 ~ 37570708 (+) True G149671
TU202665 other downstream 326119 37676995 ~ 37681109 (+) True G149843
TU202667 other downstream 326119 37676995 ~ 37681109 (+) False G149843
TU202671 other downstream 326119 37676995 ~ 37681109 (+) False G149843

Expression Profile