RNA id: TU202408


Basic Information

Item Value
RNA id TU202408
length 314
lncRNA type sense_over
GC content 0.47
exon number 2
gene id G149660
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37410440 ~ 37431835 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacacacacacacagagagagacacacacagacacacacacacacacacacacagagagagacacacacacacacacagagagagagagagacacacacacagagagagacgcacacacaaacacacacacacacagagagacatacacatagtgagagagagatggaaacacacacacagtgagagagagagagagacacacacaaacagagagagagacacacacacacaaacacacacacacacacagagacacacacacacacacacacacatagatagagagacatgcacaaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202402 lncRNA upstream 59564 37350467 ~ 37350876 (+) True G149656
TU202393 lncRNA upstream 137948 37271894 ~ 37272492 (+) True G149647
TU202390 lncRNA upstream 140444 37269249 ~ 37269996 (+) True G149646
TU202391 lncRNA upstream 140444 37269496 ~ 37269996 (+) False G149646
TU202392 lncRNA upstream 140811 37269249 ~ 37269629 (+) False G149646
TU202414 lncRNA downstream 24223 37456058 ~ 37456289 (+) True G149666
TU202650 lncRNA downstream 200822 37632657 ~ 37632882 (+) True G149833
TU202653 lncRNA downstream 204190 37636025 ~ 37670638 (+) True G149835
TU202654 lncRNA downstream 204365 37636200 ~ 37670638 (+) False G149835
TU202656 lncRNA downstream 204882 37636717 ~ 37637063 (+) False G149836
XM_039821966.1 mRNA upstream 128048 37270290 ~ 37282392 (+) True LOC120572648
XM_039823026.1 mRNA upstream 173924 37210060 ~ 37236516 (+) True LOC120573338
XM_039823029.1 mRNA upstream 265264 37126197 ~ 37145176 (+) True LOC120573342
XM_039821963.1 mRNA upstream 289353 37101576 ~ 37121087 (+) True LOC120572645
XM_039823028.1 mRNA upstream 308841 37096912 ~ 37101599 (+) True LOC120573341
XM_039821969.1 mRNA downstream 42633 37474468 ~ 37502157 (+) True LOC120572651
XM_039823031.1 mRNA downstream 101440 37533275 ~ 37558146 (+) True LOC120573344
XM_039823030.1 mRNA downstream 101440 37533275 ~ 37558146 (+) False LOC120573344
XM_039823032.1 mRNA downstream 101440 37533275 ~ 37558146 (+) False LOC120573344
XM_039823033.1 mRNA downstream 101440 37533275 ~ 37552286 (+) False LOC120573344
TU202405 other upstream 58596 37351075 ~ 37351844 (+) True G149657
TU202320 other upstream 472298 36937406 ~ 36938142 (+) True G149584
TU201846 other upstream 1066862 36339648 ~ 36343578 (+) False LOC120572889
TU201847 other upstream 1066962 36339648 ~ 36343478 (+) False LOC120572889
TU201730 other upstream 1148068 36122706 ~ 36262372 (+) False G149187
TU202419 other downstream 136078 37567913 ~ 37570708 (+) True G149671
TU202665 other downstream 245160 37676995 ~ 37681109 (+) True G149843
TU202667 other downstream 245160 37676995 ~ 37681109 (+) False G149843
TU202671 other downstream 245160 37676995 ~ 37681109 (+) False G149843
TU202698 other downstream 371258 37803093 ~ 37814879 (+) False G149853

Expression Profile