RNA id: TU202829


Basic Information

Item Value
RNA id TU202829
length 517
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G149912
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38253771 ~ 38368000 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacagacacacacacacacagacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacagacacacacacacacacacacacacacacacacacagacacacacacacatacacacacacacacacacacacacacacacacacacagacacacacacacatacacacacacacagacacacacagacacacacagacacacagacacacacacacacaggcacacacacacaacacacacacacatacacacacacacacacacacagacacagacacacacacacacacacacacacatacacacacacagacagacacacacataaacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacacacacacacacatacacacacacacacaaatacacacacatacacacacacacacacacacacacagacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202767 lncRNA upstream 30001 38171271 ~ 38292545 (+) True G149881
TU202831 lncRNA upstream 33192 38287216 ~ 38289354 (+) True G149914
TU202763 lncRNA upstream 35635 38169476 ~ 38286911 (+) False G149880
TU202766 lncRNA upstream 35635 38169476 ~ 38286911 (+) False G149880
TU202800 lncRNA upstream 167193 38152222 ~ 38155353 (+) True G149902
TU202846 lncRNA downstream 16770 38339894 ~ 38340425 (+) True G149925
TU202855 lncRNA downstream 60929 38384053 ~ 38384510 (+) True G149932
XR_005641717.1 lncRNA downstream 77217 38400341 ~ 38407337 (+) True LOC120573411
XR_005641716.1 lncRNA downstream 77217 38400341 ~ 38405866 (+) False LOC120573411
XR_005641719.1 lncRNA downstream 77217 38400341 ~ 38405866 (+) False LOC120573411
XM_039823113.1 mRNA upstream 69658 38229862 ~ 38252888 (+) True LOC120573398
XM_039823114.1 mRNA upstream 69658 38229862 ~ 38252888 (+) False LOC120573398
XM_039823099.1 mRNA upstream 216351 38064701 ~ 38106195 (+) True LOC120573389
XM_039823097.1 mRNA upstream 216351 38064702 ~ 38106195 (+) False LOC120573389
XM_039823126.1 mRNA upstream 259084 38059023 ~ 38063462 (+) False eif4e2rs1
XM_039823128.1 mRNA downstream 24532 38347656 ~ 38352838 (+) False LOC120573406
XM_039823127.1 mRNA downstream 24590 38347714 ~ 38352838 (+) False LOC120573406
XM_039823123.1 mRNA downstream 101753 38424877 ~ 38428658 (+) True LOC120573404
XM_039823122.1 mRNA downstream 128879 38452003 ~ 38456179 (+) True LOC120573403
XM_039823102.1 mRNA downstream 219994 38543118 ~ 38561745 (+) False LOC120573390
TU202708 other upstream 473970 37843221 ~ 37848576 (+) False G149853
TU202698 other upstream 507667 37803093 ~ 37814879 (+) False G149853
TU202665 other upstream 641437 37676995 ~ 37681109 (+) True G149843
TU202806 other downstream 24440 38347564 ~ 38351833 (+) False LOC120573406
TU202807 other downstream 24440 38347564 ~ 38351833 (+) False LOC120573406
TU202812 other downstream 24440 38347564 ~ 38351833 (+) False LOC120573406
TU202802 other downstream 29357 38352481 ~ 38358857 (+) False LOC120573406
TU202803 other downstream 29357 38352481 ~ 38358857 (+) False LOC120573406

Expression Profile