RNA id: TU202846


Basic Information

Item Value
RNA id TU202846
length 349
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G149925
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38339894 ~ 38340425 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agaagtaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacacacacacacacacacacacacactcacacacacacactcacacacacacacacacacacacacacacacacacacactactactacttgacacacacacaaacacacactcacacacacacacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacacactcac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202829 lncRNA upstream 16770 38322546 ~ 38323124 (+) True G149912
TU202767 lncRNA upstream 47349 38171271 ~ 38292545 (+) True G149881
TU202831 lncRNA upstream 50540 38287216 ~ 38289354 (+) True G149914
TU202763 lncRNA upstream 52983 38169476 ~ 38286911 (+) False G149880
TU202766 lncRNA upstream 52983 38169476 ~ 38286911 (+) False G149880
TU202855 lncRNA downstream 43628 38384053 ~ 38384510 (+) True G149932
XR_005641717.1 lncRNA downstream 59916 38400341 ~ 38407337 (+) True LOC120573411
XR_005641716.1 lncRNA downstream 59916 38400341 ~ 38405866 (+) False LOC120573411
XR_005641719.1 lncRNA downstream 59916 38400341 ~ 38405866 (+) False LOC120573411
XR_005641718.1 lncRNA downstream 59916 38400341 ~ 38405863 (+) False LOC120573411
XM_039823113.1 mRNA upstream 87006 38229862 ~ 38252888 (+) True LOC120573398
XM_039823114.1 mRNA upstream 87006 38229862 ~ 38252888 (+) False LOC120573398
XM_039823099.1 mRNA upstream 233699 38064701 ~ 38106195 (+) True LOC120573389
XM_039823097.1 mRNA upstream 233699 38064702 ~ 38106195 (+) False LOC120573389
XM_039823126.1 mRNA upstream 276432 38059023 ~ 38063462 (+) False eif4e2rs1
XM_039823128.1 mRNA downstream 7231 38347656 ~ 38352838 (+) False LOC120573406
XM_039823127.1 mRNA downstream 7289 38347714 ~ 38352838 (+) False LOC120573406
XM_039823123.1 mRNA downstream 84452 38424877 ~ 38428658 (+) True LOC120573404
XM_039823122.1 mRNA downstream 111578 38452003 ~ 38456179 (+) True LOC120573403
XM_039823102.1 mRNA downstream 202693 38543118 ~ 38561745 (+) False LOC120573390
TU202708 other upstream 491318 37843221 ~ 37848576 (+) False G149853
TU202698 other upstream 525015 37803093 ~ 37814879 (+) False G149853
TU202665 other upstream 658785 37676995 ~ 37681109 (+) True G149843
TU202806 other downstream 7139 38347564 ~ 38351833 (+) False LOC120573406
TU202807 other downstream 7139 38347564 ~ 38351833 (+) False LOC120573406
TU202812 other downstream 7139 38347564 ~ 38351833 (+) False LOC120573406
TU202802 other downstream 12056 38352481 ~ 38358857 (+) False LOC120573406
TU202803 other downstream 12056 38352481 ~ 38358857 (+) False LOC120573406

Expression Profile