RNA id: TU203050



Basic Information


Item Value
RNA id TU203050
length 230
lncRNA type inter_gene
GC content 0.30
exon number 2
gene id G150075
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38585468 ~ 38585726 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tattactcagtaatgatggtatgttaggttattacttagtaatgattgtatgttaggttattactcagtaatgatggtgtgttaggttattactcagtaatgatggtatgttaggttattactcagtaatgatggtatgttaggttattactcagtaatgatggtatgttaggttattactcagtaatgatggtatgttaggttattactcagtaatgatggtatgttag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203030 lncRNA upstream 67138 38463142 ~ 38518330 (+) False G150060
TU203026 lncRNA upstream 67138 38486575 ~ 38518330 (+) False G150060
TU203028 lncRNA upstream 74025 38491437 ~ 38511443 (+) False G150060
TU203043 lncRNA upstream 88202 38496536 ~ 38497266 (+) True G150068
TU203034 lncRNA upstream 90768 38474231 ~ 38494700 (+) False G150063
TU203066 lncRNA downstream 28809 38614535 ~ 38614808 (+) True G150084
TU203061 lncRNA downstream 102331 38688057 ~ 38718525 (+) False G150081
TU203063 lncRNA downstream 102331 38688057 ~ 38722641 (+) False G150081
TU203060 lncRNA downstream 103018 38688744 ~ 38689173 (+) False G150081
TU203076 lncRNA downstream 103977 38689703 ~ 38693199 (+) True G150093
XM_039823102.1 mRNA upstream 23723 38543118 ~ 38561745 (+) False LOC120573390
XM_039823103.1 mRNA upstream 23723 38543131 ~ 38561745 (+) False LOC120573390
XM_039823101.1 mRNA upstream 23723 38543131 ~ 38561745 (+) False LOC120573390
XM_039823100.1 mRNA upstream 23724 38543132 ~ 38561744 (+) True LOC120573390
XM_039823122.1 mRNA upstream 129289 38452003 ~ 38456179 (+) True LOC120573403
XM_039823106.1 mRNA downstream 346 38586072 ~ 38589499 (+) True LOC120573393
XM_039823171.1 mRNA downstream 190727 38776453 ~ 38791913 (+) True LOC120573446
XM_039823173.1 mRNA downstream 190727 38776453 ~ 38791913 (+) False LOC120573446
XM_039823172.1 mRNA downstream 190727 38776453 ~ 38788521 (+) False LOC120573446
XM_039821976.1 mRNA downstream 329693 38915419 ~ 38930312 (+) True LOC120572657
TU203025 other upstream 63965 38506463 ~ 38521503 (+) True G150060
TU202765 other upstream 127872 38453425 ~ 38457596 (+) False G149880
TU202761 other upstream 129311 38453425 ~ 38456157 (+) False G149880
TU202802 other upstream 226611 38352481 ~ 38358857 (+) False LOC120573406
TU203058 other downstream 96605 38682331 ~ 38728091 (+) True G150081
TU203168 other downstream 294845 38880571 ~ 38883270 (+) True G150139
TU203179 other downstream 331611 38917337 ~ 38924025 (+) False LOC120572657
TU203181 other downstream 349682 38935408 ~ 38936600 (+) True G150148
TU203192 other downstream 498196 39083922 ~ 39090869 (+) False LOC120572658

Expression Profile