RNA id: TU203060



Basic Information


Item Value
RNA id TU203060
length 234
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G150081
representative False

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38682331 ~ 38728091 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCCTTCACccacagcctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtctgtgtgtgtgtctctgtctgtgtgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtgtgtgttttccttccACCAATTATTCATTTCATGCTACCGACGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203066 lncRNA upstream 73936 38614535 ~ 38614808 (+) True G150084
TU203050 lncRNA upstream 103018 38585468 ~ 38585726 (+) True G150075
TU203026 lncRNA upstream 170414 38486575 ~ 38518330 (+) False G150060
TU203076 lncRNA downstream 530 38689703 ~ 38693199 (+) True G150093
TU203107 lncRNA downstream 73442 38762615 ~ 38763280 (+) True G150114
TU203098 lncRNA downstream 75966 38765139 ~ 38765851 (+) True G150105
TU203111 lncRNA downstream 89309 38778482 ~ 38778876 (+) True G150118
TU203118 lncRNA downstream 109944 38799117 ~ 38836167 (+) True G150123
XM_039823106.1 mRNA upstream 99245 38586072 ~ 38589499 (+) True LOC120573393
XM_039823102.1 mRNA upstream 126999 38543118 ~ 38561745 (+) False LOC120573390
XM_039823171.1 mRNA downstream 87280 38776453 ~ 38791913 (+) True LOC120573446
XM_039823173.1 mRNA downstream 87280 38776453 ~ 38791913 (+) False LOC120573446
XM_039823172.1 mRNA downstream 87280 38776453 ~ 38788521 (+) False LOC120573446
XM_039821976.1 mRNA downstream 226246 38915419 ~ 38930312 (+) True LOC120572657
XM_039823622.1 mRNA downstream 262869 38952042 ~ 38955968 (+) True LOC120573707
TU203025 other upstream 167241 38506463 ~ 38521503 (+) True G150060
TU202765 other upstream 231148 38453425 ~ 38457596 (+) False G149880
TU202761 other upstream 232587 38453425 ~ 38456157 (+) False G149880
TU202803 other upstream 329887 38352481 ~ 38358857 (+) False LOC120573406
TU203168 other downstream 191398 38880571 ~ 38883270 (+) True G150139
TU203179 other downstream 228164 38917337 ~ 38924025 (+) False LOC120572657
TU203181 other downstream 246235 38935408 ~ 38936600 (+) True G150148
TU203192 other downstream 394749 39083922 ~ 39090869 (+) False LOC120572658

Expression Profile