RNA id: XM_039821977.1


Basic Information

Item Value
RNA id XM_039821977.1
length 457
RNA type mRNA
GC content 0.59
exon number 5
gene id LOC120572658
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 39073358 ~ 39090901 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGCGCGTCGCGGATAAGAGCGCTTGGAGTCGCGTGTGGAAGATCTGCAGCGTCACGagAAACAGCCTCTCTGAAGTAAAGATGGCGGGTGATGGCAGCAGACAACATTTACCTAAAACTCTCCACAGTATGAACGCTTACCTCGGTTTGGATGGGAAAGGACGGACTATGACCTGCTGGCAGCTGGGAGGTCACCTGATCGAGTGTGGAGCTCAGAGTACAGGTGGGATCTTCACCGATTGGCACAAAGTTCCTGACTGGGACAACATTGGTTTCCCGGTGGTGGAGTGTTCCAGCGACggctccttcctcctctccaagCCGCCCCGAACCGGCGGCCTGGTGTCCTTCGGCACGGTGGCGGAGCAGCTGGTGTACGAGATCGGCGACCCGCGGCGGTACCTGCTGCCCGACGTCATCTGCGACTTCAGCCGCGTCGTCATCCAGGAAGTGCCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203188 lncRNA upstream 17489 39053215 ~ 39055869 (+) True G150153
TU203146 lncRNA upstream 136223 38860573 ~ 38937135 (+) False G150131
TU203198 lncRNA downstream 9835 39100736 ~ 39102011 (+) True G150161
XM_039823622.1 mRNA upstream 117390 38952042 ~ 38955968 (+) True LOC120573707
XM_039821976.1 mRNA upstream 143046 38915419 ~ 38930312 (+) True LOC120572657
XM_039823171.1 mRNA upstream 281445 38776453 ~ 38791913 (+) True LOC120573446
XM_039823173.1 mRNA upstream 281445 38776453 ~ 38791913 (+) False LOC120573446
XM_039823172.1 mRNA upstream 284837 38776453 ~ 38788521 (+) False LOC120573446
TU203181 other upstream 136758 38935408 ~ 38936600 (+) True G150148
TU203179 other upstream 149333 38917337 ~ 38924025 (+) False LOC120572657
TU203168 other upstream 190088 38880571 ~ 38883270 (+) True G150139
TU203058 other upstream 345267 38682331 ~ 38728091 (+) True G150081
TU203025 other upstream 551855 38506463 ~ 38521503 (+) True G150060

Expression Profile