Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039822060.1 |
| length | 1070 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | LOC120572700 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 18019616 ~ 18022920 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| K10639 | CCNB1IP1, HEI10; E3 ubiquitin-protein ligase CCNP1IP1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194367 | lncRNA | downstream | 310 | 18016249 ~ 18019306 (-) | True | G144037 |
| XR_005641476.1 | lncRNA | downstream | 17145 | 17992145 ~ 18002471 (-) | True | LOC120572704 |
| TU194329 | lncRNA | downstream | 129964 | 17887278 ~ 17889652 (-) | True | G144013 |
| TU194197 | lncRNA | downstream | 165802 | 17852399 ~ 17853814 (-) | False | smim20 |
| TU194173 | lncRNA | downstream | 255911 | 17762380 ~ 17763705 (-) | True | G143898 |
| TU194570 | lncRNA | upstream | 146373 | 18169293 ~ 18173021 (-) | False | mrpl52 |
| XR_005641738.1 | lncRNA | upstream | 225523 | 18248443 ~ 18250057 (-) | True | LOC120573605 |
| TU194639 | lncRNA | upstream | 513227 | 18536147 ~ 18539581 (-) | False | c14h4orf48 |
| TU194691 | lncRNA | upstream | 677289 | 18700209 ~ 18700555 (-) | True | G144275 |
| TU194729 | lncRNA | upstream | 805544 | 18828464 ~ 18830315 (-) | True | G144303 |
| XM_039822058.1 | mRNA | downstream | 5481 | 18009164 ~ 18014135 (-) | False | mettl3 |
| XM_039822057.1 | mRNA | downstream | 5713 | 18009164 ~ 18013903 (-) | True | mettl3 |
| XM_039821552.1 | mRNA | downstream | 35699 | 17981216 ~ 17983917 (-) | True | LOC120572297 |
| XM_039821554.1 | mRNA | downstream | 38441 | 17978719 ~ 17981175 (-) | True | zgc:103586 |
| XM_039821553.1 | mRNA | downstream | 38564 | 17978719 ~ 17981052 (-) | False | zgc:103586 |
| XM_039823006.1 | mRNA | upstream | 20990 | 18043910 ~ 18052078 (-) | False | oxa1l |
| XM_039823005.1 | mRNA | upstream | 20990 | 18043910 ~ 18052078 (-) | True | oxa1l |
| XM_039821294.1 | mRNA | upstream | 31658 | 18054578 ~ 18059496 (-) | False | LOC120572147 |
| XM_039821293.1 | mRNA | upstream | 31658 | 18054578 ~ 18059496 (-) | True | LOC120572147 |
| XM_039823608.1 | mRNA | upstream | 37256 | 18060176 ~ 18080804 (-) | False | LOC120573700 |
| XR_005641649.1 | other | downstream | 198539 | 17766500 ~ 17821077 (-) | False | rbpjb |
| TU194183 | other | downstream | 266627 | 17744954 ~ 17752989 (-) | False | tbc1d19 |
| TU194121 | other | downstream | 770062 | 17247951 ~ 17249554 (-) | False | LOC120572513 |
| TU194122 | other | downstream | 770062 | 17248088 ~ 17249554 (-) | False | LOC120572513 |
| XR_005641408.1 | other | downstream | 1976297 | 16019657 ~ 16043319 (-) | True | acap1 |
| TU194343 | other | upstream | 37272 | 18060192 ~ 18061155 (-) | False | LOC120573700 |
| TU194399 | other | upstream | 90932 | 18113852 ~ 18123690 (-) | True | G144058 |
| TU194667 | other | upstream | 572182 | 18595102 ~ 18597231 (-) | True | G144258 |
| unassigned_transcript_702 | other | upstream | 671779 | 18694699 ~ 18694772 (-) | True | trnan-guu_11 |
| unassigned_transcript_703 | other | upstream | 673176 | 18696096 ~ 18696169 (-) | True | trnan-guu_12 |
