RNA id: XM_039823563.1


Basic Information

Item Value
RNA id XM_039823563.1
length 984
RNA type mRNA
GC content 0.45
exon number 2
gene id LOC120573670
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 69341 ~ 70666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGGAGACACAGAACGGAGCAGAGCTCTGCTTTCCACAACTCTTCAACACCTCCTGCAGGAAGCTGACACCTCCTTGGTTTGAAGTCATGTTCATTCACATTTTGCTCTACtccatctctctgctcactGTAGTGCTCAACCTGCTCGTCATCATCTCAGTCTCCCACTTCAGgcagctccacacacccaccaacatcctcctcctctctctggctgtctcagacCTTCTAGTGGGCCTCGTGCTGATGCCGGGAGAAATCCTCAGAAATACATCCTGCTGGTTCCTTGgtgactttgtgtgttttctttataaaTATCTTTCATTTGTCATTCCATATTCATCAGTAGGTGACATGGTGCTCATATCAGTTGACCGTTACGTTGCTATTTGTGACCCTCTGCATTACACCACCAGAATCACTGTCAACAGAGTtaaactctgtgtttgtctgtgttggctcTGTTCTTTTTCCTACAGCTTTCTCTTTGTGAAGGATGAACTGACTCAACCAGGGAGGTATAATTCCTGCTACGGAGAATGTGTGTTGGTCATTGTCTATGTCGTAGCAGCTGTTGATCTTGTTTTGAGCTTTATTGTTCCAGTTACTGTCATCATAGCTCTGTATCTGAGAATATTTtccgtggctgtgtctcaggctcatgccatgcgctctcacattacagctgtcacactccagcattcagtgactccaaaggcaaagaaatctgagctgaaagcagccaggactcTTGGTGTTCTTGTAGTTGTGTTCATACTATGTTTCTGCCCATATTACGCTGTCTCTCTTGCAGATGACAGCTTGGtgaatgctttatttgcaacctATGCTCTCTTCTATTGTCactcttgtctaaaccctgtgatctatgccttgttttacccctggtttagaaaagcagttaaactcattgtaactcttcagatactgcagcctggctcctctGAGACCAACATAATGTAG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189119 lncRNA upstream 23911 45061 ~ 45430 (+) True G140203
TU189133 lncRNA downstream 91576 162242 ~ 162668 (+) True G140217
TU189134 lncRNA downstream 96288 166954 ~ 167266 (+) True G140218
TU189156 lncRNA downstream 100087 170753 ~ 170973 (+) True G140235
TU189182 lncRNA downstream 252640 323306 ~ 323708 (+) True G140261
TU189186 lncRNA downstream 291397 362063 ~ 362301 (+) True G140265
XM_039823280.1 mRNA downstream 243353 314019 ~ 315451 (+) True LOC120573509
XM_039823429.1 mRNA downstream 472463 543129 ~ 544442 (+) True LOC120573607
XM_039823288.1 mRNA downstream 677978 748644 ~ 751655 (+) True LOC120573513
XM_039823566.1 mRNA downstream 720192 790858 ~ 793879 (+) True LOC120573672
XM_039823565.1 mRNA downstream 741877 812543 ~ 815209 (+) True LOC120573671
TU189184 other downstream 265216 335882 ~ 336176 (+) True G140263
TU189223 other downstream 550450 621116 ~ 622589 (+) False LOC120572292
TU189470 other downstream 1647673 1718339 ~ 1725468 (+) False frem1a
TU189594 other downstream 1951431 2022097 ~ 2030627 (+) False G140582
TU189616 other downstream 1951926 2022592 ~ 2032225 (+) True G140594

Expression Profile