RNA id: XM_039823582.1



Basic Information


Item Value
RNA id XM_039823582.1
length 1262
RNA type mRNA
GC content 0.39
exon number 5
gene id fis1
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 17975953 ~ 17978588 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TACGTAATAAAAGTGGGCGGGGTCGAAATCTGTTTCCGGAAACATGGAGGCTGTTGTTGGCGATGTGGTAGCTCCAGAAGACCTTTTAAAATTTGAGAAGAAATACAACAGTGAGCTGGCAAAGGGAGCCGTCTCCAAAGAAACAAAGTTTGAGTATGCTTGGTGTCTCATCAGGAGTAAATACACAGATGATATCAAGAAGGGAATTGTACTCTTGGAGGAACTTGTTCAGAAAACATCAAAGGATGACTCCCGAGACTTCTTGTTCTACCTTGCAGTGGCCAACTACAGACTCAAAGAATACGAAAAAGCCCTGAAGTACATCCGAACTCTTTTGAAGAACGAACCGGGGAACAAGCAGGCTCATGAACTGGAGAAGCTTATCGATAAGGCTTTAAAGAAAGATGGCCTGGTTGGCATTGCGATCGTCGGTGGATTCGGTCTCGCTGTGGCCGGTTTGGCCGGTCTCATCGGCTTGGCTGTGTCAAAGGGAGCTGCTAAATCCTAACCTAGACATGGGACGACATGTCTTAATTTTACTGGACTGACACACTGACtctgcataaaaaaaataagtttgtgGAGAGAGCTTGAAGGATGTTAACATTTTGGTTTTAAGTTGAGAATGTACATTAAAGGGTTTAAATAATGCCAGTGAATAACCATATTGTAACAGGGTTGAGATTCGCCATACATATAACATTACTTAGCTGTATATTCACACATGATAGCATGGCACTTTTCTCAATATTTGTGTAAATAAATTAGATACTTAAGGTGCCGCTcaattttatgtaatttcttaTTTAGTTTGCACCTCAGCCTAAACTTCCTACgttcacatttacattttgtaaagaatgtctttataaaaaaaaagtgcagttgGGGTTCTGTAACTGTCTGTTGatgatttttgacatactatattgttAAGGAAAGTGTTATTGGTGCAGTAGAAAGTGTAGCTTGTAATACCAAAAGCAACCGTGTGATTTGTTTGCTGGTGAGGTAGCAGTGACTGCCATAATGCATGGTAGAAGACTAAGTCCAGCTGCTGCTGAGGAGGCTATGAGGAgatgtttgtatttattttggacATGAggtttcttttcatttgttcTGAAGACTACTTAAAATTTAAGAGAGGCAACGCACTTGGTGGAAATTAATACCTTTGTCATTTAAAATGCATATACCTTTGCTACATGTAATGGGTTGTGTTTTCCATCTcgttaattaaaatgattttgaaCAGAGAA

Function


GO:

id name namespace
GO:0000266 mitochondrial fission biological_process

KEGG:

id description
K17969 FIS1, TTC11, MDV2; mitochondrial fission 1 protein

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194329 lncRNA downstream 86301 17887278 ~ 17889652 (-) True G144013
TU194197 lncRNA downstream 122139 17852399 ~ 17853814 (-) False smim20
TU194173 lncRNA downstream 212248 17762380 ~ 17763705 (-) True G143898
XR_005641722.1 lncRNA downstream 291000 17682075 ~ 17684953 (-) False LOC120573415
XR_005641476.1 lncRNA upstream 13557 17992145 ~ 18002471 (-) True LOC120572704
TU194367 lncRNA upstream 37661 18016249 ~ 18019306 (-) True G144037
TU194570 lncRNA upstream 190705 18169293 ~ 18173021 (-) False mrpl52
XR_005641738.1 lncRNA upstream 269855 18248443 ~ 18250057 (-) True LOC120573605
TU194639 lncRNA upstream 557559 18536147 ~ 18539581 (-) False c14h4orf48
XM_039821438.1 mRNA downstream 4597 17966778 ~ 17971356 (-) True cldn15a
XM_039823437.1 mRNA downstream 9810 17956781 ~ 17966143 (-) True dnajc3b
XM_039823436.1 mRNA downstream 26296 17911988 ~ 17949657 (-) False chd3
XM_039821554.1 mRNA upstream 131 17978719 ~ 17981175 (-) True zgc:103586
XM_039821553.1 mRNA upstream 131 17978719 ~ 17981052 (-) False zgc:103586
XM_039821552.1 mRNA upstream 2628 17981216 ~ 17983917 (-) True LOC120572297
XM_039822058.1 mRNA upstream 30576 18009164 ~ 18014135 (-) False mettl3
XM_039822057.1 mRNA upstream 30576 18009164 ~ 18013903 (-) True mettl3
XR_005641649.1 other downstream 154876 17766500 ~ 17821077 (-) False rbpjb
TU194183 other downstream 222964 17744954 ~ 17752989 (-) False tbc1d19
TU194121 other downstream 726399 17247951 ~ 17249554 (-) False LOC120572513
TU194122 other downstream 726399 17248088 ~ 17249554 (-) False LOC120572513
XR_005641408.1 other downstream 1932634 16019657 ~ 16043319 (-) True acap1
TU194343 other upstream 81604 18060192 ~ 18061155 (-) False LOC120573700
TU194399 other upstream 135264 18113852 ~ 18123690 (-) True G144058
TU194667 other upstream 616514 18595102 ~ 18597231 (-) True G144258
unassigned_transcript_702 other upstream 716111 18694699 ~ 18694772 (-) True trnan-guu_11
unassigned_transcript_703 other upstream 717508 18696096 ~ 18696169 (-) True trnan-guu_12

Expression Profile