Item | Value |
---|---|
RNA id | XR_005641418.1 |
length | 305 |
lncRNA type | inter_gene |
GC content | 0.53 |
exon number | 3 |
gene id | LOC120572316 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053125.1 |
NCBI id | CM020922.1 |
chromosome length | 39125861 |
location | 500240 ~ 523058 (-) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU189206 | lncRNA | downstream | 624 | 499258 ~ 499616 (-) | True | G140285 |
TU189196 | lncRNA | downstream | 57225 | 442656 ~ 443015 (-) | True | G140275 |
XR_005641692.1 | lncRNA | downstream | 78711 | 420927 ~ 421529 (-) | True | LOC120573351 |
TU189191 | lncRNA | downstream | 80005 | 420016 ~ 420235 (-) | True | G140270 |
TU189189 | lncRNA | downstream | 126024 | 373837 ~ 374216 (-) | True | G140268 |
TU189213 | lncRNA | upstream | 33344 | 556402 ~ 556667 (-) | True | G140291 |
XR_005641701.1 | lncRNA | upstream | 102155 | 625213 ~ 626442 (-) | True | LOC120573382 |
TU189229 | lncRNA | upstream | 109669 | 632727 ~ 632947 (-) | True | G140307 |
TU189230 | lncRNA | upstream | 110588 | 633646 ~ 633845 (-) | True | G140308 |
TU189236 | lncRNA | upstream | 223530 | 746588 ~ 746860 (-) | True | G140314 |
XM_039823396.1 | mRNA | downstream | 362003 | 135443 ~ 138237 (-) | True | LOC120573587 |
XM_039823400.1 | mRNA | upstream | 77576 | 600634 ~ 606718 (-) | False | LOC120573590 |
XM_039823401.1 | mRNA | upstream | 77576 | 600634 ~ 606718 (-) | True | LOC120573590 |
XM_039823311.1 | mRNA | upstream | 383487 | 906545 ~ 913680 (-) | True | LOC120573525 |
XM_039822700.1 | mRNA | upstream | 495200 | 1018258 ~ 1429717 (-) | False | sorcs2 |
XM_039822701.1 | mRNA | upstream | 495200 | 1018258 ~ 1429717 (-) | False | sorcs2 |
TU189195 | other | downstream | 48570 | 443550 ~ 451670 (-) | True | G140274 |
unassigned_transcript_680 | other | downstream | 72756 | 427403 ~ 427484 (-) | True | trnal-aag_5 |
unassigned_transcript_679 | other | downstream | 81234 | 418935 ~ 419006 (-) | True | trnam-cau_42 |
unassigned_transcript_678 | other | downstream | 83159 | 417010 ~ 417081 (-) | True | trnam-cau_41 |
unassigned_transcript_677 | other | downstream | 84372 | 415797 ~ 415868 (-) | True | trnam-cau_40 |
TU189682 | other | upstream | 1528423 | 2051481 ~ 2058191 (-) | True | G140615 |
TU190151 | other | upstream | 3631866 | 4154924 ~ 4155547 (-) | True | G141003 |
TU190189 | other | upstream | 3751593 | 4274651 ~ 4275274 (-) | True | G141027 |
TU190191 | other | upstream | 3751593 | 4274651 ~ 4275274 (-) | False | G141027 |
TU190193 | other | upstream | 3751593 | 4274651 ~ 4275274 (-) | False | G141027 |