RNA id: unassigned_transcript_673



Basic Information


Item Value
RNA id unassigned_transcript_673
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnam-cau_36
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 406953 ~ 407024 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agcagagtgGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAACCATCCTCTGcta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU189189 lncRNA downstream 32737 373837 ~ 374216 (-) True G140268
XR_005641430.1 lncRNA downstream 37833 368338 ~ 369120 (-) True LOC120572356
TU189185 lncRNA downstream 69190 337542 ~ 337763 (-) True G140264
TU189175 lncRNA downstream 97332 309384 ~ 309621 (-) True G140254
TU189170 lncRNA downstream 126090 280547 ~ 280863 (-) True G140249
TU189191 lncRNA upstream 12992 420016 ~ 420235 (-) True G140270
XR_005641692.1 lncRNA upstream 13903 420927 ~ 421529 (-) True LOC120573351
TU189196 lncRNA upstream 35632 442656 ~ 443015 (-) True G140275
TU189206 lncRNA upstream 92234 499258 ~ 499616 (-) True G140285
XR_005641418.1 lncRNA upstream 93216 500240 ~ 523058 (-) True LOC120572316
XM_039823396.1 mRNA downstream 268716 135443 ~ 138237 (-) True LOC120573587
XM_039823400.1 mRNA upstream 193610 600634 ~ 606718 (-) False LOC120573590
XM_039823401.1 mRNA upstream 193610 600634 ~ 606718 (-) True LOC120573590
XM_039823311.1 mRNA upstream 499521 906545 ~ 913680 (-) True LOC120573525
XM_039822700.1 mRNA upstream 611234 1018258 ~ 1429717 (-) False sorcs2
XM_039822701.1 mRNA upstream 611234 1018258 ~ 1429717 (-) False sorcs2
unassigned_transcript_672 other downstream 3179 403703 ~ 403774 (-) True trnam-cau_35
unassigned_transcript_671 other downstream 8123 398759 ~ 398830 (-) True trnam-cau_34
unassigned_transcript_670 other downstream 9711 397171 ~ 397242 (-) True trnam-cau_33
unassigned_transcript_669 other downstream 11782 395100 ~ 395171 (-) True trnam-cau_32
unassigned_transcript_668 other downstream 13626 393256 ~ 393327 (-) True trnam-cau_31
unassigned_transcript_674 other upstream 1525 408549 ~ 408620 (-) True trnam-cau_37
unassigned_transcript_675 other upstream 2713 409737 ~ 409808 (-) True trnam-cau_38
unassigned_transcript_676 other upstream 6344 413368 ~ 413439 (-) True trnam-cau_39
unassigned_transcript_677 other upstream 8773 415797 ~ 415868 (-) True trnam-cau_40
unassigned_transcript_678 other upstream 9986 417010 ~ 417081 (-) True trnam-cau_41