RNA id: unassigned_transcript_706



Basic Information


Item Value
RNA id unassigned_transcript_706
length 73
RNA type tRNA
GC content 0.62
exon number 1
gene id trnak-cuu_4
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 18699425 ~ 18699497 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCCCGgctagctcagtcggtagagcatGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194639 lncRNA downstream 159844 18536147 ~ 18539581 (-) False c14h4orf48
XR_005641738.1 lncRNA downstream 449368 18248443 ~ 18250057 (-) True LOC120573605
TU194570 lncRNA downstream 526404 18169293 ~ 18173021 (-) False mrpl52
TU194367 lncRNA downstream 680119 18016249 ~ 18019306 (-) True G144037
XR_005641476.1 lncRNA downstream 696954 17992145 ~ 18002471 (-) True LOC120572704
TU194691 lncRNA upstream 712 18700209 ~ 18700555 (-) True G144275
TU194729 lncRNA upstream 128967 18828464 ~ 18830315 (-) True G144303
TU194784 lncRNA upstream 236478 18935975 ~ 18936227 (-) True G144346
TU194852 lncRNA upstream 263369 18962866 ~ 19056782 (-) False clcn3
XR_005641466.1 lncRNA upstream 293972 18993469 ~ 19001392 (-) False LOC120572676
XM_039823402.1 mRNA downstream 61433 18632078 ~ 18637992 (-) True rgp1
XM_039823403.1 mRNA downstream 61806 18632078 ~ 18637619 (-) False rgp1
XM_039823285.1 mRNA downstream 73353 18612673 ~ 18626072 (-) True pik3c3
XM_039823286.1 mRNA downstream 73354 18612673 ~ 18626071 (-) False pik3c3
XM_039821643.1 mRNA downstream 138372 18551540 ~ 18561053 (-) True faah2b
XM_039823086.1 mRNA upstream 142579 18842076 ~ 18845520 (-) True ankrd53
XM_039821855.1 mRNA upstream 178624 18878121 ~ 18886053 (-) True si:dkey-185m8.2
XM_039822852.1 mRNA upstream 203469 18902966 ~ 18912675 (-) True LOC120573249
XM_039823440.1 mRNA upstream 238621 18938118 ~ 18945452 (-) True trmt10b
XM_039822020.1 mRNA upstream 285135 18984632 ~ 18991780 (-) True ino80b
unassigned_transcript_705 other downstream 494 18698858 ~ 18698931 (-) True trnan-guu_14
unassigned_transcript_704 other downstream 1090 18698262 ~ 18698335 (-) True trnan-guu_13
unassigned_transcript_703 other downstream 3256 18696096 ~ 18696169 (-) True trnan-guu_12
unassigned_transcript_702 other downstream 4653 18694699 ~ 18694772 (-) True trnan-guu_11
TU194667 other downstream 102194 18595102 ~ 18597231 (-) True G144258
unassigned_transcript_707 other upstream 288 18699785 ~ 18699857 (-) True trnak-cuu_5
unassigned_transcript_708 other upstream 37585 18737082 ~ 18737152 (-) True trnag-gcc_1
unassigned_transcript_709 other upstream 265869 18965366 ~ 18965437 (-) True trnad-guc_5
unassigned_transcript_710 other upstream 267445 18966942 ~ 18967013 (-) True trnad-guc_6
unassigned_transcript_711 other upstream 271895 18971392 ~ 18971463 (-) True trnad-guc_7