RNA id: TU204012



Basic Information


Item Value
RNA id TU204012
length 235
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G150692
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1079208 ~ 1079935 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttggataaagaagaacgggacagt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203742 lncRNA downstream 55646 1022036 ~ 1023562 (-) False G150515
TU203944 lncRNA downstream 90062 988912 ~ 989146 (-) True G150675
TU203926 lncRNA downstream 110006 965657 ~ 969202 (-) True G150659
TU203885 lncRNA downstream 354078 724718 ~ 725130 (-) True G150627
TU203739 lncRNA downstream 357067 720524 ~ 722141 (-) True G150513
TU204000 lncRNA upstream 27824 1107759 ~ 1110258 (-) True G150682
TU203998 lncRNA upstream 56224 1136159 ~ 1217724 (-) False G150681
TU204037 lncRNA upstream 90110 1170045 ~ 1174023 (-) True G150694
TU204021 lncRNA upstream 90358 1170293 ~ 1174023 (-) False G150694
TU204003 lncRNA upstream 112224 1192159 ~ 1194472 (-) True G150685
XM_039823727.1 mRNA downstream 388303 684486 ~ 690905 (-) False swsap1
XM_039823726.1 mRNA downstream 388303 684486 ~ 690905 (-) True swsap1
XM_039824566.1 mRNA downstream 542984 533532 ~ 536224 (-) True elof1
XM_039823901.1 mRNA downstream 735636 328685 ~ 343572 (-) False LOC120573973
XM_039823689.1 mRNA upstream 30983 1110918 ~ 1166720 (-) True LOC120573830
XM_039824568.1 mRNA upstream 73494 1153429 ~ 1213566 (-) True sh2b1
XM_039823698.1 mRNA upstream 137894 1217829 ~ 1242261 (-) True tlcd3ba
XM_039823700.1 mRNA upstream 172169 1252104 ~ 1253365 (-) False LOC120573837
XM_039823699.1 mRNA upstream 172169 1252104 ~ 1253365 (-) True LOC120573837
TU203743 other downstream 55646 1022036 ~ 1023562 (-) True G150515
TU203749 other downstream 340479 736721 ~ 738729 (-) True G150519
TU203760 other downstream 390091 667677 ~ 689117 (-) True G150530
TU203786 other downstream 818290 260536 ~ 260918 (-) True G150554
TU203701 other downstream 889789 148618 ~ 189419 (-) True G150487
TU204033 other upstream 90358 1170293 ~ 1174023 (-) False G150694
TU203947 other upstream 98436 1178371 ~ 1200218 (-) False sh2b1
TU204049 other upstream 158307 1238242 ~ 1239990 (-) True G150705
TU204050 other upstream 159490 1239425 ~ 1239990 (-) False G150705
TU204064 other upstream 222720 1302655 ~ 1313347 (-) False LOC120573832

Expression Profile