RNA id: TU204044



Basic Information


Item Value
RNA id TU204044
length 568
lncRNA type intronic
GC content 0.60
exon number 2
gene id G150701
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1192677 ~ 1194079 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cccacaccattacaccaccaccaccaccagcctgcccagtggtaacaaggcatgatgggtcccccacaccattacacccccaccaccaccagcctgcccagtggtaacaaggcatgatgggtcccccacaccattacaccccccccaccagcagcctgcccagtggtaacaaggcatgatgggtcccccacaccattacacccccaccaccaccagcctgcccagtggtaacaaggcatgatgggtcccccacaccattacaacaccaccaccagcagcctgcccagtggtaacaagacatgatgggtcccccacaccattacacccccaccaccaccagcctgcccagtggtaacaagacatgatgggtccaccacaccattacacccccaccagcagcctgcccagtggtaacaaggcatgatgggtcccccacaccattacacccccaccagcagcctgcccagtggtaacaagacatgatgggtcccccacaccattacacccccaccaccagcctgcccagtggtaacaaggcatgatgggtcccccacaccattacaccccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204037 lncRNA downstream 18654 1170045 ~ 1174023 (-) True G150694
TU204021 lncRNA downstream 18654 1170293 ~ 1174023 (-) False G150694
TU204000 lncRNA downstream 82419 1107759 ~ 1110258 (-) True G150682
TU204012 lncRNA downstream 112742 1079208 ~ 1079935 (-) True G150692
TU203742 lncRNA downstream 169115 1022036 ~ 1023562 (-) False G150515
TU204045 lncRNA upstream 9427 1203506 ~ 1203828 (-) True G150702
TU203997 lncRNA upstream 20532 1214611 ~ 1217724 (-) True G150681
TU204002 lncRNA upstream 24255 1218334 ~ 1219080 (-) True G150684
TU203975 lncRNA upstream 41113 1235192 ~ 1341734 (-) True G150679
TU203985 lncRNA upstream 47545 1241624 ~ 1339779 (-) False G150679
XM_039823689.1 mRNA downstream 25957 1110918 ~ 1166720 (-) True LOC120573830
XM_039823727.1 mRNA downstream 501772 684486 ~ 690905 (-) False swsap1
XM_039823726.1 mRNA downstream 501772 684486 ~ 690905 (-) True swsap1
XM_039824566.1 mRNA downstream 656453 533532 ~ 536224 (-) True elof1
XM_039823902.1 mRNA downstream 849105 328685 ~ 343572 (-) True LOC120573973
XM_039823698.1 mRNA upstream 23750 1217829 ~ 1242261 (-) True tlcd3ba
XM_039823700.1 mRNA upstream 58025 1252104 ~ 1253365 (-) False LOC120573837
XM_039823699.1 mRNA upstream 58025 1252104 ~ 1253365 (-) True LOC120573837
XM_039823694.1 mRNA upstream 61680 1255759 ~ 1291070 (-) False nlk1
XM_039823693.1 mRNA upstream 61680 1255759 ~ 1291070 (-) True nlk1
TU204033 other downstream 18654 1170293 ~ 1174023 (-) False G150694
TU203743 other downstream 169115 1022036 ~ 1023562 (-) True G150515
TU203749 other downstream 453948 736721 ~ 738729 (-) True G150519
TU203760 other downstream 503560 667677 ~ 689117 (-) True G150530
TU203786 other downstream 931759 260536 ~ 260918 (-) True G150554
TU204049 other upstream 44163 1238242 ~ 1239990 (-) True G150705
TU204050 other upstream 45346 1239425 ~ 1239990 (-) False G150705
TU204064 other upstream 108576 1302655 ~ 1313347 (-) False LOC120573832
XR_005641991.1 other upstream 262668 1456747 ~ 1460981 (-) True LOC120575422
XR_005641992.1 other upstream 262668 1456747 ~ 1458866 (-) False LOC120575422

Expression Profile