RNA id: TU204258



Basic Information


Item Value
RNA id TU204258
length 729
RNA type TUCP
GC content 0.47
exon number 7
gene id LOC120574289
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1591689 ~ 1739925 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AgtctctgatctctctctctctgtatatgtAACGTGTGGGGTCAGGAAGGCTTTCTGACTAGGCAGCCACATCTACACAGACCAGGCAGAGCTAATGAGACATAATAAAAGTATGACTCTGTAAAGATGAAGAGATAAGATGGAGGAAGACAACGATGACAACCcagcagctggaggaggaggagagtctGAACCCAAATCTGTACCATCTGCAGCCAATGAGAAAGTAGAGGAGTTGGAGGAGAATTCAGCTGAAATCAAGTGTGATCCAGTGAATGAACCTGGTGAAGGTGAAGACTCAGAGAAGAATGATGACAACACAGGAGGAGAGTCTGCAATCACATCGGTATCATCTGTAAATAATGAGAACGGAGAGGCTGATGAAGTGTCAGGTTCAGGGAACAGAACTCAAGTGCAGACTGGAGTAGGTGGTAAAGAAGCTGTGAGTGTGGGCAGGCAGAAGGAGTACTGGATCAGAAGATGGCTGGGCTGGCTGATGTGGTGCTGGGCTGTGTTCCTCAGTGGGGCTGCATACTTGAAGTTCCAGTGTGTGGCGTGGCTATTGGCTGCAGAGGCTTCCGAAGTAGAGGAGTTGGAGGAGAATTCAGCTGAAATCAAGAGTGATCCAGTGAATGAACCTGGTGAAGGTGAACACTCAGAGAAGAATGATGACAACACAGGAGGAGAGTCTGAAAACACATCTGTACCATCTGCAAATAATGTGAAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204273 lncRNA downstream 19026 1639479 ~ 1639851 (-) True G150865
TU204268 lncRNA downstream 41206 1609820 ~ 1617671 (-) True G150861
XR_005641847.1 lncRNA downstream 48413 1609660 ~ 1610464 (-) True LOC120574250
TU204259 lncRNA downstream 69569 1588768 ~ 1589308 (-) True G150855
TU204146 lncRNA downstream 138598 1519958 ~ 1520279 (-) True G150776
TU204267 lncRNA upstream 24619 1723700 ~ 1738851 (-) True G150860
TU204261 lncRNA upstream 25041 1724122 ~ 1737007 (-) True G150856
TU204238 lncRNA upstream 116984 1816065 ~ 1822124 (-) True LOC120573867
TU204459 lncRNA upstream 210335 1909416 ~ 1982822 (-) False G150992
TU204453 lncRNA upstream 246484 1945565 ~ 1971635 (-) True G150992
XM_039824589.1 mRNA downstream 11808 1620674 ~ 1647069 (-) True LOC120574288
XM_039824588.1 mRNA downstream 40823 1606215 ~ 1618054 (-) True LOC120574287
XM_039823845.1 mRNA downstream 115467 1520386 ~ 1543410 (-) True LOC120573930
XM_039825099.1 mRNA downstream 149765 1500772 ~ 1509112 (-) True LOC120574716
XM_039825100.1 mRNA downstream 149842 1500772 ~ 1509035 (-) False LOC120574716
XM_039823753.1 mRNA upstream 117212 1816293 ~ 1822128 (-) False LOC120573867
XM_039823750.1 mRNA upstream 117212 1816293 ~ 1822128 (-) False LOC120573867
XM_039823748.1 mRNA upstream 117212 1816293 ~ 1822128 (-) False LOC120573867
XM_039823749.1 mRNA upstream 117212 1816293 ~ 1822128 (-) False LOC120573867
XM_039823754.1 mRNA upstream 117212 1816293 ~ 1821815 (-) False LOC120573867
TU204266 other downstream 38406 1608688 ~ 1620471 (-) False LOC120574287
XR_005641990.1 other downstream 193569 1461342 ~ 1465308 (-) False LOC120575421
XR_005641989.1 other downstream 193569 1461342 ~ 1465308 (-) False LOC120575421
XR_005641991.1 other downstream 197896 1456747 ~ 1460981 (-) True LOC120575422
XR_005641992.1 other downstream 200011 1456747 ~ 1458866 (-) False LOC120575422
TU204260 other upstream 25041 1724122 ~ 1739481 (-) False G150856
TU204241 other upstream 119643 1818724 ~ 1821846 (-) False LOC120573867
XR_005641788.1 other upstream 154561 1853642 ~ 1854101 (-) False LOC120573864
TU204533 other upstream 456515 2155596 ~ 2161722 (-) False farsa
TU204768 other upstream 843348 2542429 ~ 2598982 (-) False G151146

Expression Profile