RNA id: TU204260


Basic Information

Item Value
RNA id TU204260
length 523
RNA type TUCP
GC content 0.41
exon number 2
gene id G150856
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1724122 ~ 1739481 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAATATACTCaagaaaaatgttgaagacaTCAAAACACGTGTGAGTCAAGCTTTATTTGATGCTACAGAGAAAGTCAAAAAACGAAGAGGAGACCTAGATATGTGGGTGAAGGAATTTTCCAGTTTGTTAAAAGATCAGCTAACATTCAACACCATCTGTTGTCAAAACTTCAGTGACATAAACAATTTTGACTTTCtaaaagaagagacagagaaaggccTTGTATCTGTCATAAAGGAAGTGAGCAGCCTCTCACTGGATAAGATGGAGGAATTCAGGATGAAGCCTGATCAAATCCTCATCGATCAGCTGTGTAACTGTTGCTGGGTAACGTGTCCATTCTGTGCAGCTGTTTGTACCAACACATTGGAAGATCACAGTCCTGATGACCACAGCGTGCCCTTTCATCGATCTGCTGCAGTCAATGGTTTTCactacagaaacacagagatacTGAGTGTTGATTTCTGCACAACAGATGTTGTGAGTGATGGAAGTTTTTACCCTGATCAAGATCCAGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU204277 lncRNA downstream 37919 1685477 ~ 1686203 (-) True G150869
TU204273 lncRNA downstream 84271 1639479 ~ 1639851 (-) True G150865
TU204268 lncRNA downstream 106451 1609820 ~ 1617671 (-) True G150861
XR_005641847.1 lncRNA downstream 113658 1609660 ~ 1610464 (-) True LOC120574250
TU204259 lncRNA downstream 134814 1588768 ~ 1589308 (-) True G150855
TU204238 lncRNA upstream 76584 1816065 ~ 1822124 (-) True LOC120573867
TU204459 lncRNA upstream 169935 1909416 ~ 1982822 (-) False G150992
TU204453 lncRNA upstream 206084 1945565 ~ 1971635 (-) True G150992
TU204454 lncRNA upstream 206084 1945565 ~ 1971635 (-) False G150992
TU204456 lncRNA upstream 209789 1949270 ~ 2072683 (-) False G150992
XM_039824590.1 mRNA downstream 25075 1657794 ~ 1699047 (-) True LOC120574289
XM_039824589.1 mRNA downstream 77053 1620674 ~ 1647069 (-) True LOC120574288
XM_039824588.1 mRNA downstream 106068 1606215 ~ 1618054 (-) True LOC120574287
XM_039823845.1 mRNA downstream 180712 1520386 ~ 1543410 (-) True LOC120573930
XM_039825100.1 mRNA downstream 215087 1500772 ~ 1509035 (-) False LOC120574716
XM_039823753.1 mRNA upstream 76812 1816293 ~ 1822128 (-) False LOC120573867
XM_039823750.1 mRNA upstream 76812 1816293 ~ 1822128 (-) False LOC120573867
XM_039823748.1 mRNA upstream 76812 1816293 ~ 1822128 (-) False LOC120573867
XM_039823749.1 mRNA upstream 76812 1816293 ~ 1822128 (-) False LOC120573867
XM_039823754.1 mRNA upstream 76812 1816293 ~ 1821815 (-) False LOC120573867
TU204258 other downstream 25041 1658877 ~ 1699081 (-) False LOC120574289
TU204266 other downstream 103651 1608688 ~ 1620471 (-) False LOC120574287
XR_005641990.1 other downstream 258814 1461342 ~ 1465308 (-) False LOC120575421
XR_005641989.1 other downstream 258814 1461342 ~ 1465308 (-) False LOC120575421
XR_005641991.1 other downstream 263141 1456747 ~ 1460981 (-) True LOC120575422
TU204241 other upstream 79243 1818724 ~ 1821846 (-) False LOC120573867
XR_005641788.1 other upstream 114161 1853642 ~ 1854101 (-) False LOC120573864
TU204533 other upstream 416115 2155596 ~ 2161722 (-) False farsa
TU204768 other upstream 802948 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 857321 2596802 ~ 2598982 (-) True G151146

Expression Profile