RNA id: TU204462


Basic Information

Item Value
RNA id TU204462
length 1561
lncRNA type sense_over
GC content 0.45
exon number 4
gene id G150994
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2011976 ~ 2034999 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acagagagagacacacacacacacacagagagacacacacacagagagacacacacacagagagagacacacacacagagagacacacacacacagagagagacacacacacacacagagagagacacacacagagacacacacacagacagacagacagacagacacaccctATTTCTCTCTCCAGATGTTCCCAGTAACATGTCtctgtgaactattttagtcaaatatgagatcagattctcaacgagccgccatgacagtctttGAATTtcccggagaaaccagaccccacGTGACGCTGTTCATCCAATcggctgccggttttcatttttgggggcGACaacacagattagcgccgcctgttgctatggagacgtatcaggtctcgtctcttcggtgagttctgaggaactttctggaccgactcggggagactgatcagtcccgactggctttactgccgtctgattggccgtctggttggtgcgTCTGCAGCTTTagaggcaaggcaaggcagctttatttgtagagcacatttcagcaacaaggaaattcaaagtgctttacatgaaacattaaaaacagttagaaaacaattaaaaacaatttcaaagcattaaaacaattaacaacaatttcagatcattaaaagacaagaataaaatgtacagtgcagtataagaattttaaagaaagagcagttaaaaataggttatttaaagaaaggcaacattaaaaacatatgtcttcagcctggatttaaaagaactgagttgcagcagacctgcagttttctgggagtttgttccagatatgtggagcataaaaactgaacgctgcttccccctgtttagttctaaggtaaggtgccttgaagtagccattgggggcttaaaacaccatcgagctagTCTTGAATCCTAAGGAGCAGGACACGGATTccccttttccaccaacaaGAACCAGGTGCTGGTTCAGAGCTAGTGCCGGTTCGGAGTTGGTTCGACTGACTAGCCTCCAAAGAACGCTGACGTAAGCGGTTCTTAACTTCTGGCCCAGCGATGATTTGGTGCTACTTAAGAACCACTTTTTACCGGTTCGGAGCCGGTGCTTTTGGTGGTCGAAAAACAAAGAACTGATTTGAAACTATAGGCTCTGGCTCCGAACCAGCGCCAGCTCTGCCTTGGTGGAAAAGAGGCATGACCGATTCTCCTCTGCCTTTTTGAGATGAACAGGTTAAGTGCAGATGGTAGTAAAGCTACCAGGGggttttcctggctcagaatgggccttttggGGGTCTGGGGTTTTGTCCCCATGGAAACTTTGAGCGTCAAAGATTTCATTTCTTGCATTCTGATGCATTTtaggcaccaatttatggtctttatttatgtccacGTGTGTCAACAAAACCACGACACAGCCAGAACGCAGCTCATCCGCCCCGAGTGGAATTTCATTCAGGTTAAGATTTGGTTAAGAAGAAAGTTTGGTAACccttttacttgaaggtatctacataagagtaatgtccgcaacactgctttaaactccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU204498 lncRNA downstream 2715 2008066 ~ 2009261 (-) True G151007
TU204471 lncRNA downstream 5666 2005189 ~ 2006310 (-) True G151003
TU204493 lncRNA downstream 10573 2001006 ~ 2001403 (-) False G151006
TU204494 lncRNA downstream 10573 2001006 ~ 2001403 (-) False G151006
TU204495 lncRNA downstream 10573 2001006 ~ 2001403 (-) True G151006
TU204492 lncRNA upstream 31707 2066706 ~ 2067646 (-) True G151005
TU204477 lncRNA upstream 64959 2099958 ~ 2126236 (-) False G151004
TU204524 lncRNA upstream 78933 2113932 ~ 2119908 (-) True G151024
TU204475 lncRNA upstream 87578 2122577 ~ 2123672 (-) True G151004
TU204483 lncRNA upstream 87578 2122577 ~ 2126236 (-) False G151004
XM_039823744.1 mRNA downstream 139884 1845740 ~ 1872092 (-) True LOC120573864
XM_039823750.1 mRNA downstream 189848 1816293 ~ 1822128 (-) False LOC120573867
XM_039824602.1 mRNA upstream 97733 2132732 ~ 2161724 (-) True farsa
XM_039823890.1 mRNA upstream 129721 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA upstream 129721 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA upstream 136242 2171241 ~ 2209257 (-) False ilf3b
XM_039823830.1 mRNA upstream 179595 2214594 ~ 2224968 (-) True LOC120573916
XR_005641788.1 other downstream 157875 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 190130 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 272495 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 312895 1658877 ~ 1699081 (-) False LOC120574289
TU204266 other downstream 391505 1608688 ~ 1620471 (-) False LOC120574287
TU204533 other upstream 120597 2155596 ~ 2161722 (-) False farsa
TU204768 other upstream 507430 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 561803 2596802 ~ 2598982 (-) True G151146
TU204905 other upstream 838919 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 876327 2911326 ~ 2915367 (-) True G151227

Expression Profile