RNA id: TU204472


Basic Information

Item Value
RNA id TU204472
length 484
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G151004
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2030990 ~ 2141338 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agcagCCCACAGTTTGAGTCCGACCAGCGGCTTTTTGCTGcagccccccctccctcctctctctctctctctctctgtctgtctctgtctctctctctctgtctgtctctctctctgtctctgtctctctctctgtctctctctctgtctctctgtctctctctctctctctctgtctctctctgtctctctctctctctctctgtctctctctctctctctctgtttctctctctctctctctctgtctctctctctgtctctctctctctctctctctctctgtctctctctctgtctctgtctgtctctctctgtctctctctctctctctctctctcccctacgTGCCTGTCTACATCTGTCCTATCCATTTAAGGCCAAAAtggccacacacaaaaaacgaTATCTGCTGCAGCCCTTGGTTTCCGGTCATCAGGGCAGGTGTCTACTGTCCGACCAATCAGAGCTCCCGGAGGATGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU204475 lncRNA downstream 2008 2122577 ~ 2123672 (-) True G151004
TU204524 lncRNA downstream 5772 2113932 ~ 2119908 (-) True G151024
TU204500 lncRNA downstream 52896 2008932 ~ 2072784 (-) True G151008
TU204492 lncRNA downstream 58034 2066706 ~ 2067646 (-) True G151005
TU204462 lncRNA downstream 90681 2011976 ~ 2034999 (-) True G150994
TU204527 lncRNA upstream 914 2127150 ~ 2128852 (-) True G151026
TU204534 lncRNA upstream 84283 2210519 ~ 2212318 (-) True G151030
TU204536 lncRNA upstream 86719 2212955 ~ 2214142 (-) True G151031
TU204539 lncRNA upstream 99083 2225319 ~ 2225764 (-) True G151033
TU204540 lncRNA upstream 112911 2239147 ~ 2239811 (-) True G151034
XM_039825206.1 mRNA downstream 67041 2004876 ~ 2058639 (-) True LOC120574768
XM_039823744.1 mRNA downstream 253588 1845740 ~ 1872092 (-) True LOC120573864
XM_039823748.1 mRNA downstream 303552 1816293 ~ 1822128 (-) False LOC120573867
XM_039824602.1 mRNA upstream 6496 2132732 ~ 2161724 (-) True farsa
XM_039823890.1 mRNA upstream 38484 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA upstream 38484 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA upstream 45005 2171241 ~ 2209257 (-) False ilf3b
XM_039823830.1 mRNA upstream 88358 2214594 ~ 2224968 (-) True LOC120573916
XR_005641788.1 other downstream 271579 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 303834 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 386199 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 426599 1658877 ~ 1699081 (-) False LOC120574289
TU204266 other downstream 505209 1608688 ~ 1620471 (-) False LOC120574287
TU204533 other upstream 29360 2155596 ~ 2161722 (-) False farsa
TU204768 other upstream 416193 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 470566 2596802 ~ 2598982 (-) True G151146
TU204905 other upstream 747682 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 785090 2911326 ~ 2915367 (-) True G151227

Expression Profile