RNA id: TU204475



Basic Information


Item Value
RNA id TU204475
length 890
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G151004
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2030990 ~ 2141338 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCCACCACCACCAGGGCGGCTATGAGCAGGTAGACCGCGGCCTTGGGCAGGGGGATCAGGTCCTTCACTATGGGCTTGTACTGCCGGTACAGAGGGTCCTCTAGGGTCACCTGGTACGGGTACACCTGGGCTCCAGCGGTCAAGTTCAGGGTCTGGAAATTATAGGCGTTCATGGCGATGAGATTCCTTGTTCATGCAACATGCAACGAGAGTGACTtctttttggcttcttctagGGCTGGCCGATAACCGAGAGAAATTTAGATATCACTATCGATATCGTAGGGtggacaattggtgctttcacaaagaAATTTGTGGATATAATTCAATTGTTGTTCAAGTTAAGCCTGGGCTGCAGCAATGGAGTTCAAGTTGGGGGAATTACAGGCATTATAGGCATTCATGATGATGGGATTTTGTTGCTCAGGCAACCTGAGAGTGACTTCTTTGTGGCTTCTTCCTCCTCACTCAGAGCTGAGACGTAAAGCTACGAGACCAAAAACCCTGATGGGAGCACGCGAGTTCTCCAGACCTTATTTTGAAGCTCCAAGTCCATCCAAATGTTGGAGTAAATATTTCTTCTTGGTTTCCTGAATCTCACAAGTATAGCTGCTGttgtgtctccctctctctctgtgtctctctctgtctgtctctctctctctctgtctgtctctctctctctctgtgtgtctgtctctctctctctgtctctttgtgtctctgtctctctctctctctctctgtctgtgtctctgtctctgtccttgGTGCTGAAATGAAGTGCGCCCTCTGCCAGAAGGTAGACTACAAACTGTCAGCTCCGCCCACTTGGaccactcctctctctctctctctctctctctctctctctctctctctctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204524 lncRNA downstream 2669 2113932 ~ 2119908 (-) True G151024
TU204500 lncRNA downstream 49793 2008932 ~ 2072784 (-) True G151008
TU204492 lncRNA downstream 54931 2066706 ~ 2067646 (-) True G151005
TU204462 lncRNA downstream 87578 2011976 ~ 2034999 (-) True G150994
TU204498 lncRNA downstream 113316 2008066 ~ 2009261 (-) True G151007
TU204472 lncRNA upstream 2008 2125680 ~ 2126236 (-) False G151004
TU204473 lncRNA upstream 2008 2125680 ~ 2126236 (-) False G151004
TU204481 lncRNA upstream 2008 2125680 ~ 2126236 (-) False G151004
TU204491 lncRNA upstream 2008 2125680 ~ 2126236 (-) False G151004
TU204527 lncRNA upstream 3478 2127150 ~ 2128852 (-) True G151026
XM_039825206.1 mRNA downstream 63938 2004876 ~ 2058639 (-) True LOC120574768
XM_039823744.1 mRNA downstream 250485 1845740 ~ 1872092 (-) True LOC120573864
XM_039823748.1 mRNA downstream 300449 1816293 ~ 1822128 (-) False LOC120573867
XM_039824602.1 mRNA upstream 9060 2132732 ~ 2161724 (-) True farsa
XM_039823890.1 mRNA upstream 41048 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA upstream 41048 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA upstream 47569 2171241 ~ 2209257 (-) False ilf3b
XM_039823830.1 mRNA upstream 90922 2214594 ~ 2224968 (-) True LOC120573916
XR_005641788.1 other downstream 268476 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 300731 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 383096 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 423496 1658877 ~ 1699081 (-) False LOC120574289
TU204266 other downstream 502106 1608688 ~ 1620471 (-) False LOC120574287
TU204533 other upstream 31924 2155596 ~ 2161722 (-) False farsa
TU204768 other upstream 418757 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 473130 2596802 ~ 2598982 (-) True G151146
TU204905 other upstream 750246 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 787654 2911326 ~ 2915367 (-) True G151227

Expression Profile