RNA id: TU204554



Basic Information


Item Value
RNA id TU204554
length 426
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G151047
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2286435 ~ 2286860 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


actaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcaaatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggcctatattaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccaataaggtctatata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204551 lncRNA downstream 16243 2269970 ~ 2270192 (-) True G151044
TU204540 lncRNA downstream 46624 2239147 ~ 2239811 (-) True G151034
TU204539 lncRNA downstream 60671 2225319 ~ 2225764 (-) True G151033
TU204536 lncRNA downstream 72293 2212955 ~ 2214142 (-) True G151031
TU204534 lncRNA downstream 74117 2210519 ~ 2212318 (-) True G151030
TU204566 lncRNA upstream 20041 2306901 ~ 2307253 (-) True G151053
TU204734 lncRNA upstream 63140 2350000 ~ 2351016 (-) True G151139
TU204729 lncRNA upstream 65198 2352058 ~ 2353558 (-) True G151134
TU204742 lncRNA upstream 80610 2367470 ~ 2368317 (-) True G151141
TU204743 lncRNA upstream 80610 2367470 ~ 2368317 (-) False G151141
XM_039823830.1 mRNA downstream 61467 2214594 ~ 2224968 (-) True LOC120573916
XM_039823890.1 mRNA downstream 77178 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA downstream 77178 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA downstream 77178 2171241 ~ 2209257 (-) False ilf3b
XM_039824602.1 mRNA downstream 124711 2132732 ~ 2161724 (-) True farsa
XM_039825406.1 mRNA upstream 68582 2355442 ~ 2433220 (-) True si:ch211-194b1.1
XM_039823842.1 mRNA upstream 151242 2438102 ~ 2450469 (-) True pglyrp6
XM_039824144.1 mRNA upstream 451075 2737935 ~ 2750253 (-) True LOC120574080
XM_039824003.1 mRNA upstream 514522 2801382 ~ 2820321 (-) True si:ch211-106h11.3
XM_039824004.1 mRNA upstream 553573 2840433 ~ 2842813 (-) True LOC120574018
TU204533 other downstream 124713 2155596 ~ 2161722 (-) False farsa
XR_005641788.1 other downstream 432334 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 464589 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 546954 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 587354 1658877 ~ 1699081 (-) False LOC120574289
TU204768 other upstream 255569 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 309942 2596802 ~ 2598982 (-) True G151146
TU204905 other upstream 587058 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 624466 2911326 ~ 2915367 (-) True G151227
TU205089 other upstream 1024867 3311727 ~ 3316915 (-) True G151344

Expression Profile