RNA id: TU204742



Basic Information


Item Value
RNA id TU204742
length 383
lncRNA type intronic
GC content 0.49
exon number 2
gene id G151141
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2367470 ~ 2368317 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gttaacgttaacgttcgTTATCTAATAGTTCAGTTCAGCCTTGGATCAGCTGCAGCTCTGAGCCTCTGGCTACGGTGAGCACAACTTTCACCAAAGGAACATGAATGGGAATCTGTATCGGCAGAACAACCAATaggaactctctctctctccctctctgtctctctctctccctctctgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctgtctctctctctctctctctctctctctctgtctctctctgtctctctctctgtctctctctgtctctctctctctctctctgtctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctgtct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204729 lncRNA downstream 13912 2352058 ~ 2353558 (-) True G151134
TU204734 lncRNA downstream 16454 2350000 ~ 2351016 (-) True G151139
TU204566 lncRNA downstream 60217 2306901 ~ 2307253 (-) True G151053
TU204554 lncRNA downstream 80610 2286435 ~ 2286860 (-) True G151047
TU204551 lncRNA downstream 97278 2269970 ~ 2270192 (-) True G151044
TU204759 lncRNA upstream 31492 2399809 ~ 2643750 (-) False G151146
TU204760 lncRNA upstream 31492 2399809 ~ 2598188 (-) False G151146
TU204783 lncRNA upstream 51108 2419425 ~ 2419709 (-) True G151153
TU204757 lncRNA upstream 70350 2438667 ~ 2643750 (-) False G151146
TU204756 lncRNA upstream 72681 2440998 ~ 2598188 (-) False G151146
XM_039823830.1 mRNA downstream 142502 2214594 ~ 2224968 (-) True LOC120573916
XM_039823890.1 mRNA downstream 158213 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA downstream 158213 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA downstream 158213 2171241 ~ 2209257 (-) False ilf3b
XM_039824602.1 mRNA downstream 205746 2132732 ~ 2161724 (-) True farsa
XM_039823842.1 mRNA upstream 69785 2438102 ~ 2450469 (-) True pglyrp6
XM_039824144.1 mRNA upstream 369618 2737935 ~ 2750253 (-) True LOC120574080
XM_039824003.1 mRNA upstream 433065 2801382 ~ 2820321 (-) True si:ch211-106h11.3
XM_039824004.1 mRNA upstream 472116 2840433 ~ 2842813 (-) True LOC120574018
XM_039824168.1 mRNA upstream 631333 2999650 ~ 3003392 (-) True trir
TU204533 other downstream 205748 2155596 ~ 2161722 (-) False farsa
XR_005641788.1 other downstream 513369 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 545624 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 627989 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 668389 1658877 ~ 1699081 (-) False LOC120574289
TU204768 other upstream 174112 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 228485 2596802 ~ 2598982 (-) True G151146
TU204905 other upstream 505601 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 543009 2911326 ~ 2915367 (-) True G151227
TU205089 other upstream 943410 3311727 ~ 3316915 (-) True G151344

Expression Profile