RNA id: TU204757



Basic Information


Item Value
RNA id TU204757
length 283
lncRNA type sense_over
GC content 0.49
exon number 4
gene id G151146
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2399809 ~ 2805411 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgcgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgcctgtctctgtgtgtgtctctgtgtgtgtttgtgtgtctctctgtgtgtctgtgtgtgtgtgtttgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtatgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204783 lncRNA downstream 18958 2419425 ~ 2419709 (-) True G151153
TU204742 lncRNA downstream 70350 2367470 ~ 2368317 (-) True G151141
TU204743 lncRNA downstream 70350 2367470 ~ 2368317 (-) False G151141
TU204729 lncRNA downstream 85109 2352058 ~ 2353558 (-) True G151134
TU204734 lncRNA downstream 87651 2350000 ~ 2351016 (-) True G151139
TU204854 lncRNA upstream 32847 2676597 ~ 2677069 (-) True G151200
TU204861 lncRNA upstream 71919 2715669 ~ 2716220 (-) True G151203
TU204863 lncRNA upstream 71919 2715669 ~ 2716220 (-) False G151203
TU204894 lncRNA upstream 100746 2744496 ~ 2745709 (-) True G151210
TU204848 lncRNA upstream 233214 2876964 ~ 2929497 (-) True G151194
XM_039825406.1 mRNA downstream 5447 2355442 ~ 2433220 (-) True si:ch211-194b1.1
XM_039823830.1 mRNA downstream 213699 2214594 ~ 2224968 (-) True LOC120573916
XM_039823890.1 mRNA downstream 229410 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA downstream 229410 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA downstream 229410 2171241 ~ 2209257 (-) False ilf3b
XM_039824144.1 mRNA upstream 94185 2737935 ~ 2750253 (-) True LOC120574080
XM_039824003.1 mRNA upstream 157632 2801382 ~ 2820321 (-) True si:ch211-106h11.3
XM_039824004.1 mRNA upstream 196683 2840433 ~ 2842813 (-) True LOC120574018
XM_039824168.1 mRNA upstream 355900 2999650 ~ 3003392 (-) True trir
XM_039824169.1 mRNA upstream 355900 2999650 ~ 3003391 (-) False trir
TU204533 other downstream 276945 2155596 ~ 2161722 (-) False farsa
XR_005641788.1 other downstream 584566 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 616821 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 699186 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 739586 1658877 ~ 1699081 (-) False LOC120574289
TU204905 other upstream 230168 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 267576 2911326 ~ 2915367 (-) True G151227
TU205089 other upstream 667977 3311727 ~ 3316915 (-) True G151344
unassigned_transcript_716 other upstream 1386429 4030179 ~ 4030260 (-) True trnas-aga_11
TU205621 other upstream 1718098 4361848 ~ 4367333 (-) False LOC120575464

Expression Profile