RNA id: TU204783



Basic Information


Item Value
RNA id TU204783
length 250
lncRNA type intronic
GC content 0.34
exon number 2
gene id G151153
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2419425 ~ 2419709 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttttttgataactctgcaaacccttggtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttaccttcacaggtgtgctttgtcagggttcattagtggaagtttttcccttattaataaaaaagcaaagggtggctactttgaggaatctaaaatataagtacataattccatatgtgttcattcatagttttgatgccttcagtgagaatctacaatgtaaatagtcatgaaaataaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204742 lncRNA downstream 51108 2367470 ~ 2368317 (-) True G151141
TU204743 lncRNA downstream 51108 2367470 ~ 2368317 (-) False G151141
TU204729 lncRNA downstream 65867 2352058 ~ 2353558 (-) True G151134
TU204734 lncRNA downstream 68409 2350000 ~ 2351016 (-) True G151139
TU204566 lncRNA downstream 112172 2306901 ~ 2307253 (-) True G151053
TU204757 lncRNA upstream 18958 2438667 ~ 2643750 (-) False G151146
TU204756 lncRNA upstream 21289 2440998 ~ 2598188 (-) False G151146
TU204774 lncRNA upstream 21515 2441224 ~ 2500990 (-) True G151147
TU204779 lncRNA upstream 52701 2472410 ~ 2487633 (-) True G151149
TU204811 lncRNA upstream 55450 2475159 ~ 2490191 (-) True G151169
XM_039823830.1 mRNA downstream 194457 2214594 ~ 2224968 (-) True LOC120573916
XM_039823890.1 mRNA downstream 210168 2164720 ~ 2209257 (-) False ilf3b
XM_039823889.1 mRNA downstream 210168 2164720 ~ 2209257 (-) True ilf3b
XM_039823892.1 mRNA downstream 210168 2171241 ~ 2209257 (-) False ilf3b
XM_039824602.1 mRNA downstream 257701 2132732 ~ 2161724 (-) True farsa
XM_039823842.1 mRNA upstream 18393 2438102 ~ 2450469 (-) True pglyrp6
XM_039824144.1 mRNA upstream 318226 2737935 ~ 2750253 (-) True LOC120574080
XM_039824003.1 mRNA upstream 381673 2801382 ~ 2820321 (-) True si:ch211-106h11.3
XM_039824004.1 mRNA upstream 420724 2840433 ~ 2842813 (-) True LOC120574018
XM_039824168.1 mRNA upstream 579941 2999650 ~ 3003392 (-) True trir
TU204533 other downstream 257703 2155596 ~ 2161722 (-) False farsa
XR_005641788.1 other downstream 565324 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 597579 1818724 ~ 1821846 (-) False LOC120573867
TU204260 other downstream 679944 1724122 ~ 1739481 (-) False G150856
TU204258 other downstream 720344 1658877 ~ 1699081 (-) False LOC120574289
TU204768 other upstream 122720 2542429 ~ 2598982 (-) False G151146
TU204751 other upstream 177093 2596802 ~ 2598982 (-) True G151146
TU204905 other upstream 454209 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 491617 2911326 ~ 2915367 (-) True G151227
TU205089 other upstream 892018 3311727 ~ 3316915 (-) True G151344

Expression Profile