RNA id: TU204854



Basic Information


Item Value
RNA id TU204854
length 331
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G151200
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2676597 ~ 2677069 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tctgtctctctccgtctctctctctgtctctctctgtctgtctgtctctctccgtctctctctctgtctctctctgtctgtctgtctctctctgtctgtctgtctctctctctgtctctctctctctctgtctctctctgtctgtctgtctctcttcgtctctctctctctctgtctctctctgtctgtctgtctctctccgtctctctctctgtctctctctgtctgtctgtctctctctctgtctctctctctctctctctgtctgtctgtctctctccgtctctctctctgtctgtctgtctctctctctgtctctctgtctgtcgct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204759 lncRNA downstream 32847 2399809 ~ 2643750 (-) False G151146
TU204757 lncRNA downstream 32847 2438667 ~ 2643750 (-) False G151146
TU204755 lncRNA downstream 77615 2540287 ~ 2598982 (-) False G151146
TU204761 lncRNA downstream 77615 2540287 ~ 2598982 (-) False G151146
TU204767 lncRNA downstream 77615 2540287 ~ 2598982 (-) False G151146
TU204861 lncRNA upstream 38600 2715669 ~ 2716220 (-) True G151203
TU204863 lncRNA upstream 38600 2715669 ~ 2716220 (-) False G151203
TU204894 lncRNA upstream 67427 2744496 ~ 2745709 (-) True G151210
TU204848 lncRNA upstream 199895 2876964 ~ 2929497 (-) True G151194
TU204847 lncRNA upstream 240642 2917711 ~ 2920158 (-) False G151194
XM_039823842.1 mRNA downstream 226128 2438102 ~ 2450469 (-) True pglyrp6
XM_039825406.1 mRNA downstream 243377 2355442 ~ 2433220 (-) True si:ch211-194b1.1
XM_039823830.1 mRNA downstream 451629 2214594 ~ 2224968 (-) True LOC120573916
XM_039823889.1 mRNA downstream 467340 2164720 ~ 2209257 (-) True ilf3b
XM_039824144.1 mRNA upstream 60866 2737935 ~ 2750253 (-) True LOC120574080
XM_039824003.1 mRNA upstream 124313 2801382 ~ 2820321 (-) True si:ch211-106h11.3
XM_039824004.1 mRNA upstream 163364 2840433 ~ 2842813 (-) True LOC120574018
XM_039824168.1 mRNA upstream 322581 2999650 ~ 3003392 (-) True trir
XM_039824169.1 mRNA upstream 322581 2999650 ~ 3003391 (-) False trir
TU204768 other downstream 77615 2542429 ~ 2598982 (-) False G151146
TU204751 other downstream 77615 2596802 ~ 2598982 (-) True G151146
TU204533 other downstream 514875 2155596 ~ 2161722 (-) False farsa
XR_005641788.1 other downstream 822496 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 854751 1818724 ~ 1821846 (-) False LOC120573867
TU204905 other upstream 196849 2873918 ~ 2896343 (-) True G151216
TU204921 other upstream 234257 2911326 ~ 2915367 (-) True G151227
TU205089 other upstream 634658 3311727 ~ 3316915 (-) True G151344
unassigned_transcript_716 other upstream 1353110 4030179 ~ 4030260 (-) True trnas-aga_11
TU205621 other upstream 1684779 4361848 ~ 4367333 (-) False LOC120575464

Expression Profile