RNA id: TU204905



Basic Information


Item Value
RNA id TU204905
length 630
RNA type TUCP
GC content 0.55
exon number 3
gene id G151216
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2873918 ~ 2896343 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GAGTAGATGGGCAGGTTCTTGTAGGGGTTTATGACGACACAGAAGAGCCCAGAGTATGTATATATGAGACCAGAGTAGTATCTCTCCTTCAGGTTGTGCAGCACAGAGGCCTCGTTCAGGCAGGTGAGCTCGGCCATGTCCTCCACCTTGCTGAACTTGGGCGGGTTCATCTTCTGGATGTCATCCTTGTTCACCTTGATCTTCTTCCCCGAGTCTGCCAGCTCGACCACGCACTCGTCGCCGCGCTCCTCCTTCACAGAGCCGGCCTCGAAGCCCAGGCGCTCCGAGGGCACCCAGACCAGCTTCTTGGTGGCCCAGTCCGCCTGCGCCAGTGGGTTGTTGACCACATTGCGGTCCACGTACAGGAACTTGTCTGCGGCCGACATGGTAGGCTTTTTGGGTGCAGGACGCCTTTTAGAGGGTGGCTAACAACAACCGGGTGGCTCAGTCAGCGTCGCCGTTGAGTCAATCTTCTCTTCTTGTCGACAGCAGCTTCGCAGAGAGTTCTGGCTAAACTACAGTGCTcgcttcctccctctctttctcgaCTCCGGTCActctttctatctttttttttttttttctctctctctctccctcttccttctGCCCTCCCTCCTTCACTGGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204762 lncRNA downstream 68507 2596802 ~ 2805411 (-) False G151146
TU204894 lncRNA downstream 128209 2744496 ~ 2745709 (-) True G151210
TU204861 lncRNA downstream 157698 2715669 ~ 2716220 (-) True G151203
TU204863 lncRNA downstream 157698 2715669 ~ 2716220 (-) False G151203
TU204854 lncRNA downstream 196849 2676597 ~ 2677069 (-) True G151200
TU204847 lncRNA upstream 21368 2917711 ~ 2920158 (-) False G151194
TU204849 lncRNA upstream 45938 2942281 ~ 2944617 (-) True G151195
TU204964 lncRNA upstream 52742 2949085 ~ 2949619 (-) True G151261
TU204978 lncRNA upstream 73611 2969954 ~ 2970309 (-) True G151275
TU204986 lncRNA upstream 89750 2986093 ~ 2986852 (-) True G151282
XM_039824004.1 mRNA downstream 31105 2840433 ~ 2842813 (-) True LOC120574018
XM_039824003.1 mRNA downstream 53597 2801382 ~ 2820321 (-) True si:ch211-106h11.3
XM_039824144.1 mRNA downstream 123665 2737935 ~ 2750253 (-) True LOC120574080
XM_039823842.1 mRNA downstream 423449 2438102 ~ 2450469 (-) True pglyrp6
XM_039825406.1 mRNA downstream 440698 2355442 ~ 2433220 (-) True si:ch211-194b1.1
XM_039824168.1 mRNA upstream 103307 2999650 ~ 3003392 (-) True trir
XM_039824169.1 mRNA upstream 103307 2999650 ~ 3003391 (-) False trir
XM_039824171.1 mRNA upstream 111746 3008089 ~ 3035012 (-) False hook2
XM_039824170.1 mRNA upstream 111746 3008089 ~ 3035011 (-) True hook2
XM_039825164.1 mRNA upstream 224342 3120685 ~ 3141710 (-) True rtbdn
TU204768 other downstream 274936 2542429 ~ 2598982 (-) False G151146
TU204751 other downstream 274936 2596802 ~ 2598982 (-) True G151146
TU204533 other downstream 712196 2155596 ~ 2161722 (-) False farsa
XR_005641788.1 other downstream 1019817 1853642 ~ 1854101 (-) False LOC120573864
TU204241 other downstream 1052072 1818724 ~ 1821846 (-) False LOC120573867
TU204921 other upstream 14983 2911326 ~ 2915367 (-) True G151227
TU205089 other upstream 415384 3311727 ~ 3316915 (-) True G151344
unassigned_transcript_716 other upstream 1133836 4030179 ~ 4030260 (-) True trnas-aga_11
TU205621 other upstream 1465505 4361848 ~ 4367333 (-) False LOC120575464
TU205622 other upstream 1465505 4361848 ~ 4367333 (-) True LOC120575464

Expression Profile